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Updated: Feb 2, 2026

Detection of Horizontal Gene Transfer Mediated by Natural Conjugative Plasmids in E. coli
Published on: March 24, 2023
pBuzz: A cryptic rolling-circle plasmid from a commensal Escherichia coli has two inversely oriented oriTs and is
1School of Life and Environmental Sciences, The University of Sydney, NSW, Australia.
Abstract:
Ampicillin, streptomycin and sulphamethoxazole resistant commensal E. coli 838-3B contains five plasmids that range in size from >90 kb to <2 kb. The resistance genes blaTEM (ampicillin), strA (streptomycin) and sul2 (sulphamethoxazole) transferred along with a B/O plasmid named p838B-R. However, three plasmids smaller than 7 kb were also found in transconjugants, suggesting that they could be mobilised by the B/O plasmid. The complete sequences of p838B-R and pBuzz, a small plasmid mobilised by p838B-R with 70% efficiency, were determined. p838B-R is 94,803 bp and contains an 8400 bp resistance island that includes the three antibiotic resistance genes. The p838B-R backbone contains a complete conjugative transfer region, including an oriT site upstream of nikAB that resembles the experimentally-defined oriT of R64. The 1982 bp pBuzz contains a rep gene and sites associated with replication that resemble those of pC194/pUB110 family rolling-circle plasmids. It also contains two, inversely oriented copies of an 84 bp sequence that differs from the oriT region in p838B-R at just 6 positions. These oriT-like sites likely explain the ability of pBuzz to co-transfer with the B/O plasmid using the NikB relaxase and NikA accessory protein encoded by p838B-R, i.e. pBuzz utilises relaxase-in trans mobilisation. Several rolling-circle plasmids related to pBuzz were found in the GenBank non-redundant nucleotide database. They contain diverse potential oriTs, including sequences similar to known oriTs found in conjugative plasmids of I-complex (I1, B/O, K, Z and I2), L or M types.
Insights
This study details how antibiotic resistance genes on a large plasmid (p838B-R) were transferred with a smaller plasmid (pBuzz) in E. coli. This plasmid mobilization explains the spread of antimicrobial resistance.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Commensal E. coli can harbor multiple plasmids, contributing to antibiotic resistance.
- Plasmid p838B-R, a B/O plasmid, carries resistance genes for ampicillin, streptomycin, and sulphamethoxazole.
- The transfer of antibiotic resistance genes is a significant public health concern.
Purpose of the Study:
- To characterize the plasmids involved in the transfer of antibiotic resistance.
- To determine the complete sequences of the conjugative plasmid p838B-R and the mobilised plasmid pBuzz.
- To elucidate the mechanism of co-transfer between p838B-R and pBuzz.
Main Methods:
- Plasmid DNA extraction and sequencing.
- Conjugation experiments to assess gene transfer.
- Bioinformatic analysis of plasmid sequences and comparison with known plasmids.
Main Results:
- The 94,803 bp plasmid p838B-R contains an 8400 bp resistance island with blaTEM, strA, and sul2 genes.
- The 1982 bp plasmid pBuzz was mobilized by p838B-R with 70% efficiency.
- pBuzz possesses oriT-like sites enabling relaxase-in-trans mobilization by p838B-R's relaxase and accessory proteins.
- Related rolling-circle plasmids with diverse oriTs were identified in the GenBank database.
Conclusions:
- p838B-R is a conjugative plasmid capable of mobilizing other plasmids like pBuzz.
- The identified oriT-like sequences in pBuzz facilitate its co-transfer via relaxase-in-trans mobilization.
- The findings provide insights into the mechanisms of antibiotic resistance gene dissemination via plasmids.
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