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Published on: October 10, 2025
Reproducibility and intercorrelation of graph theoretical measures in structural brain connectivity networks
Timo Roine1, Ben Jeurissen2, Daniele Perrone3
1imec-Vision Lab, Department of Physics, University of Antwerp, Antwerp, Belgium; Turku Brain and Mind Center, University of Turku, Finland.
Reproducibility of structural brain networks is generally excellent using diffusion MRI and tractography, with specific parameters like streamline density and thresholding improving reliability for robust connectome analysis.
Area of Science:
- Neuroimaging
- Computational Neuroscience
- Network Science
Background:
- Diffusion-weighted magnetic resonance imaging (dMRI) non-invasively probes brain microstructure.
- Advances enable identification of complex white matter fiber configurations, improving structural connectivity analysis via tractography.
- Whole-brain structural connectivity networks (connectomes) are reconstructed by gray matter parcellation and tractography.
Purpose of the Study:
- To investigate the reproducibility and intercorrelation of network properties, connectivity weights, and tractography parameters in structural brain networks.
- To provide guidelines for reproducible investigations of structural brain networks.
Main Methods:
- Reconstruction of structural brain connectivity networks using constrained spherical deconvolution (CSD) based probabilistic streamlines tractography.
- Acquisition of dMRI data from 19 subjects (b=2800 s/mm², 75 gradient orientations).
- Computation of intrasubject variability using residual bootstrapping and replication using a Human Connectome Project test-retest dataset.
Main Results:
- Graph theoretical metrics showed excellent reproducibility, except for betweenness centrality.
- Approximately one million streamlines are necessary for excellent reproducibility, with higher densities further improving it.
- Reproducibility slightly decreases with higher CSD order but improves in binary networks with high threshold values; network properties and connectivity weights are highly intercorrelated.
Conclusions:
- Established parameters for reproducible structural brain network analysis.
- Findings offer practical guidance for researchers using tractography and graph theory to study brain connectivity.
- Highlights the importance of streamline density, thresholding, and CSD order for reliable connectome reconstruction.
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