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Updated: Jan 31, 2026

Ultrastructural Localization of Endogenous LC3 by On-Section Correlative Light-Electron Microscopy
Published on: March 31, 2023
Localization dynamics of endogenous fluorescently labeled RAF1 in EGF-stimulated cells
Sachin V Surve1, Paul J Myers2, Samantha A Clayton3
1Department of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261.
Abstract:
Activation of the epidermal growth factor (EGF) receptor (EGFR) at the cell surface initiates signaling through the RAS-RAF-MAPK/ERK1/2 pathway and receptor endocytosis. Whether this signaling continues from endosomes remains unclear, because RAS is predominantly located on the plasma membrane, and the localization of endogenous RAF kinases, downstream effectors of RAS, is not defined. To examine RAF localization, we labeled endogenous RAF1 with mVenus using gene editing. From 10 to 15% of RAF1-mVenus (<2000 molecules/cell), which was initially entirely cytosolic, transiently translocated to the plasma membrane after EGF stimulation. Following an early burst of translocation, the membrane-associated RAF1-mVenus was undetectable by microscopy or subcellular fractionation, and this pool was estimated to be <200 molecules per cell. In contrast, persistent EGF-dependent translocation of RAF1-mVenus to the plasma membrane was driven by the RAF inhibitor sorafenib, which increases the affinity of Ras-GTP:RAF1 interactions. RAF1-mVenus was not found in EGFR-containing endosomes under any conditions. Computational modeling of RAF1 dynamics revealed that RAF1 membrane abundance is controlled most prominently by association and dissociation rates from RAS-GTP and by RAS-GTP concentration. The model further suggested that the relatively protracted activation of the RAF-MEK1/2-ERK1/2 module, in comparison with RAF1 membrane localization, may involve multiple rounds of cytosolic RAF1 rebinding to active RAS at the membrane.
Insights
Epidermal growth factor receptor (EGFR) signaling involves RAF1 kinase. This study found RAF1 transiently moves to the plasma membrane after EGF stimulation but not into endosomes, suggesting localized signaling.
Area of Science:
- Cell biology
- Molecular signaling
- Signal transduction pathways
Background:
- Epidermal growth factor (EGF) receptor (EGFR) activation triggers intracellular signaling cascades, including the RAS-RAF-MAPK/ERK1/2 pathway.
- The precise localization and dynamics of RAF kinases, key downstream effectors of RAS, during EGFR signaling, particularly from endosomes, remain poorly understood.
Purpose of the Study:
- To investigate the subcellular localization and dynamics of endogenous RAF1 during EGF-stimulated signaling.
- To determine if RAF1 participates in signaling originating from endosomes.
- To elucidate the factors controlling RAF1 membrane association.
Main Methods:
- Gene editing to label endogenous RAF1 with mVenus.
- Microscopy and subcellular fractionation to track RAF1-mVenus localization.
- EGF stimulation and treatment with the RAF inhibitor sorafenib.
- Computational modeling of RAF1 dynamics.
Main Results:
- Following EGF stimulation, a small fraction (10-15%) of cytosolic RAF1-mVenus transiently translocated to the plasma membrane.
- The membrane-associated RAF1 pool was transient and rapidly diminished (<200 molecules/cell).
- RAF1-mVenus was not detected in EGFR-containing endosomes under any experimental conditions.
- Sorafenib promoted persistent EGF-dependent RAF1-mVenus translocation by enhancing Ras-GTP:RAF1 interactions.
- Computational modeling indicated RAF1 membrane abundance is primarily regulated by RAS-GTP binding kinetics and concentration.
Conclusions:
- RAF1's plasma membrane association is transient after EGF stimulation and does not occur within EGFR-containing endosomes.
- The concentration and binding dynamics with RAS-GTP are critical determinants of RAF1 membrane localization.
- Prolonged RAF-MEK1/2-ERK1/2 pathway activation may involve repeated cycles of RAF1 rebinding to RAS-GTP at the plasma membrane.
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