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Published on: November 11, 2022
Modeling stochastic processes in disease spread across a heterogeneous social system
Minkyoung Kim1, Dean Paini2, Raja Jurdak3,4,5
1Data61, Commonwealth Scientific and Industrial Research Organisation, Pullenvale, QLD 4069, Australia; minkyoung.kimm@gmail.com.
This study introduces a novel diffusion framework to model infectious disease spread in complex social systems. It uses human mobility data to reveal hidden infection pathways and estimate cross-regional disease flow.
Area of Science:
- Epidemiology
- Complex Systems Science
- Computational Biology
Background:
- Infectious disease spread is complex, influenced by external factors and internal system dynamics.
- Understanding diffusion mechanisms is vital for effective disease control but challenging due to hidden transmission routes.
- Existing models often struggle to capture the dynamic nature of disease spread and human mobility.
Purpose of the Study:
- To develop a new diffusion framework for stochastic processes modeling disease spread in metapopulations.
- To incorporate human mobility as topological pathways within heterogeneous social systems.
- To quantify diffusion dynamics (exogeneity, endogeneity) and estimate cross-regional infection flow using Bayesian inference and Granger causality.
Main Methods:
- Proposed a novel diffusion framework for stochastic processes.
- Utilized Bayesian inference with the stochastic Expectation-Maximization algorithm.
- Incorporated human mobility data to represent topological pathways in social systems.
- Applied Granger causality to estimate cross-regional infection flow.
Main Results:
- Successfully quantified underlying diffusion dynamics, distinguishing between exogeneity and endogeneity.
- Accurately estimated cross-regional infection flow.
- Demonstrated model robustness through simulations with noisy data, including missing or delayed case reporting.
- Validated the model using 15 years of dengue outbreak data from Australia.
Conclusions:
- The proposed diffusion framework effectively models infectious disease spread by integrating human mobility.
- The model provides valuable insights into diffusion dynamics and infection flow, crucial for public health interventions.
- The framework's robustness and validation with real-world data highlight its practical applicability for disease control strategies.
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