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Evolution of the Population Structure of Staphylococcus pseudintermedius in France
Marine Bergot1, Patricia Martins-Simoes1,2, Hélène Kilian3
1Centre International de Recherche en Infectiologie (CIRI), Equipe Pathogénie des Staphylocoques, Faculté de Médecine Laennec, Lyon, France.
Abstract:
Staphylococcus pseudintermedius is a colonizer as well as an important pathogen of dogs where it is responsible for skin, ear and post-operative infections. The emergence of methicillin-resistant S. pseudintermedius (MRSP) in the early 2000s, which were additionally resistant to most veterinary-licensed antibiotics, drew specific attention to these pathogens due to the limitations created in veterinary therapeutic options. Multiple studies showed that the sequence type (ST)71 was the most frequently identified clone in Europe. A few years ago, several publications have suggested a decline of the ST71 clone and the emergence of the ST258 lineage in Northern Europe. In this study, we show that ST71 is also decreasing over time in France and that the non-ST71 population is highly heterogeneous. Globally, the non-ST71 clones are more susceptible to antibiotics, which might be good news for veterinarians. Two other lineages, ST258 and ST496, seem to be successful in France. These isolates, as well as representatives of the ST71 clone, underwent whole-genome sequence. This study shows that the ST71 and ST496 clusters are highly homogenous while the ST258 cluster is more diverse. Each ST possesses a specific pattern of resistance and virulence genes. The reasons for the apparent and simultaneous success of the ST258 and ST496 clones remain unclear. But the emergence of the ST496 clone will require monitoring given its multi-resistant genotype and threat to canine health.
Insights
The prevalence of the dominant methicillin-resistant Staphylococcus pseudintermedius (MRSP) ST71 clone is declining in France. New MRSP lineages, ST258 and ST496, are emerging, with ST496 posing a significant threat due to its multi-resistant genotype.
Area of Science:
- Veterinary microbiology
- Canine infectious diseases
- Antimicrobial resistance
Background:
- Staphylococcus pseudintermedius is a key pathogen in dogs, causing various infections.
- The emergence of methicillin-resistant S. pseudintermedius (MRSP) has limited treatment options.
- Sequence type (ST)71 was previously the dominant MRSP clone in Europe.
Purpose of the Study:
- To investigate the changing landscape of MRSP clones in France.
- To characterize the genetic features, including resistance and virulence genes, of emerging MRSP lineages.
- To assess the potential threat posed by new MRSP clones to canine health.
Main Methods:
- Whole-genome sequencing of MRSP isolates.
- Analysis of sequence types (STs) and their prevalence over time.
- Comparative genomics to identify resistance and virulence gene patterns.
Main Results:
- The prevalence of ST71 MRSP is decreasing in France.
- The non-ST71 MRSP population is genetically diverse and generally more susceptible to antibiotics.
- Emerging lineages ST258 and ST496 show increasing success in France.
- ST71 and ST496 clusters are genetically homogenous, while ST258 is more diverse.
- ST496 possesses a multi-resistant genotype, indicating a potential threat.
Conclusions:
- The MRSP clonal landscape in France is shifting, with a decline in ST71 and the rise of ST258 and ST496.
- While non-ST71 clones may offer more treatment flexibility, ST496 warrants close monitoring due to its resistance profile.
- Further research is needed to understand the factors driving the success of ST258 and ST496.
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