Related Experiment Video
Updated: Jan 30, 2026

Novel Passive Clearing Methods for the Rapid Production of Optical Transparency in Whole CNS Tissue
Published on: May 8, 2018
Rapid optical tissue clearing using poly(acrylamide-co-styrenesulfonate) hydrogels for three-dimensional imaging
Yuta Ono1, Ikuhiko Nakase2, Akikazu Matsumoto1
1Department of Applied Chemistry, Graduate School of Engineering, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka, 599-8531, Japan.
Abstract:
Optical tissue clearing methods are attractive for three-dimensional imaging of intact tissues and organs. A CLARITY (clear lipid-exchanged acrylamide-hybridized rigid imaging/immunostaining/in situ-hybridization-compatible tissue-hydrogel) method using polyacrylamide gels was recently developed. In the current study, we used poly(acrylamide-co-styrenesulfonate) gels as a polyelectrolyte gel for a passive CLARITY method. First, radical copolymerization of acrylamide (AAm) and sodium p-styrenesulfonate (SS) at different ratios was performed. The composition of the copolymer could be controlled by changing the monomer ratio. With increased SS content, the molecular weight decreased and the refractive index slightly increased. The poly(AAm-co-SS) hydrogels with a higher SS content were more swollen and looser. The clearing time could be reduced using the poly(AAm-co-SS) hydrogel with a higher SS content. Three-dimensional fluorescence imaging of the poly(AAm-co-SS) hydrogel-cleared tissues was successfully performed after treatment using a blue fluorescent DNA stain. Therefore, the use of the poly(AAm-co-SS) hydrogel improved the clearing process in the passive CLARITY method, and the technique is useful for fluorescence imaging of DNA. © 2019 Wiley Periodicals, Inc. J Biomed Mater Res Part B: Appl Biomater 107B: 2297-2304, 2019.
Related Concept Videos
Imaging Biological Samples with Optical Microscopy
In optical microscopy, the specimen to be viewed is placed on a glass slide and clipped on the stage...
Dimensional Analysis
Conversion Factors and Dimensional Analysis
The unit...
Dimensional Analysis
In fluid mechanics, dimensional...
Dimensional Analysis
Dimensional analysis allows us to analyze and compare physical quantities on a...
Dimensional Analysis
Three-Dimensional Force System

