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Updated: Jan 29, 2026

Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
Published on: August 9, 2019
Upregulation of transforming growth factor-beta type I receptor by interferon consensus sequence-binding protein in
Jee Young Sung1, Kyungsil Yoon2, Sang-Kyu Ye3
1Rare Cancer Branch, Division of Clinical Research, National Cancer Center, 323 Ilsan-ro, Ilsandong-gu, Goyang-si, Gyeonggi-do 10408, Republic of Korea.
Abstract:
Transforming growth factor-beta (TGF-β) is a known tumor suppressor, which also exerts a tumor promoting activity at an advanced stage of cancer. Previously, we reported that expression of interferon consensus sequence-binding protein (ICSBP), also known as interferon regulatory factor-8, is positively correlated with TGF-β type I receptor (TGF-β RI) expression in osteosarcoma patient tissues. In this study, we demonstrated that ICSBP upregulated TGF-β RI and induced epithelial-to-mesenchymal transition-like phenomena in human osteosarcoma cell lines. As determined by soft agar growth of osteosarcoma cells and xenografted mouse models, ICSBP increased tumorigenicity, which was reversed by ICSBP knock-down or a TGF-β RI inhibitor. To test whether ICSBP directly regulates the promoter activity of TGF-β RI, we performed a TGF-β RI promoter assay, an electro mobility shift assay, and a chromatin immunoprecipitation assay. We observed that TGF-β RI promoter was activated in ICSBP-overexpressing osteosarcoma cells. Exploiting serial deletions and mutations of the TGF-β RI promoter, we found a putative ICSBP-binding site at nucleotides -216/-211 (GGXXTC) in the TGF-β RI promoter. Our data suggest that ICSBP upregulates TGF-β RI expression by binding to this site, causing ICSBP-mediated tumor progression in osteosarcoma cells. In addition, we found a positive correlation between ICSBP and TGF-β RI expression in several types of tumors using the cBioportal database. SUMMARY: We demonstrated that interferon consensus sequence-binding protein upregulates transforming growth factor-beta type I receptor (TGF-β RI) expression by binding to nucleotides -216/-211 (GGXXTC) in the TGF-β RI promoter, which resulted in increased tumorigenicity and tumor progression in human osteosarcoma cells.
Insights
Interferon consensus sequence-binding protein (ICSBP) promotes osteosarcoma progression by upregulating TGF-β RI. ICSBP binds to the TGF-β RI promoter, increasing tumor cell growth and tumorigenicity.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Research
Background:
- Transforming growth factor-beta (TGF-β) has dual roles in cancer, acting as a suppressor early on and a promoter later.
- Interferon consensus sequence-binding protein (ICSBP), also known as interferon regulatory factor-8, shows a positive correlation with TGF-β type I receptor (TGF-β RI) in osteosarcoma.
Purpose of the Study:
- To investigate the role of ICSBP in osteosarcoma progression.
- To elucidate the mechanism by which ICSBP influences TGF-β RI expression and tumorigenicity.
Main Methods:
- Osteosarcoma cell line experiments including soft agar growth assays and xenograft mouse models.
- TGF-β RI promoter assays, electro mobility shift assays, and chromatin immunoprecipitation assays.
- Analysis of ICSBP and TGF-β RI expression correlation in tumor types using cBioportal database.
Main Results:
- ICSBP overexpression upregulated TGF-β RI and induced epithelial-to-mesenchymal transition-like phenomena in osteosarcoma cells.
- ICSBP increased osteosarcoma cell tumorigenicity, which was reversible by ICSBP knockdown or TGF-β RI inhibition.
- ICSBP directly binds to a specific site (nucleotides -216/-211) in the TGF-β RI promoter, activating its expression.
Conclusions:
- ICSBP promotes osteosarcoma progression by upregulating TGF-β RI expression through direct promoter binding.
- Targeting the ICSBP-TGF-β RI axis may offer a therapeutic strategy for osteosarcoma.
- A positive correlation between ICSBP and TGF-β RI expression exists in multiple tumor types.
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