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Updated: Jan 29, 2026

ATAC-Seq Optimization for Cancer Epigenetics Research
Published on: June 30, 2022
Interplay between epigenetic abnormalities and deregulated expression of microRNAs in cancer
Ammad Ahmad Farooqi1, Enrique Fuentes-Mattei2, Sundas Fayyaz3
1Department of Biochemistry, Rashid Latif Medical College, Lahore, Pakistan.
Abstract:
Epigenetic abnormalities and aberrant expression of non-coding RNAs are two emerging features of cancer cells, both of which are responsible for deregulated gene expression. In this review, we describe the interplay between the two. Specific themes include epigenetic silencing of tumor suppressor miRNAs, epigenetic activation of oncogenic miRNAs, epigenetic aberrations caused by miRNAs, and naturally occurring compounds which modulate miRNA expression through epigenetic mechanisms.
Insights
Epigenetic changes and non-coding RNAs (ncRNAs) are key in cancer. This review explores their complex interplay, including how ncRNAs affect gene expression through epigenetic mechanisms.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Epigenetic abnormalities and aberrant non-coding RNA (ncRNA) expression are hallmarks of cancer.
- These factors contribute to the deregulation of gene expression critical for tumorigenesis.
Purpose of the Study:
- To review the intricate interplay between epigenetic modifications and ncRNAs in cancer.
- To elucidate mechanisms of epigenetic silencing/activation of microRNAs (miRNAs) and miRNA-mediated epigenetic alterations.
Main Methods:
- Literature review of studies investigating epigenetic regulation of ncRNAs and vice versa.
- Analysis of specific themes including miRNA epigenetic silencing, activation, and miRNA-induced epigenetic changes.
Main Results:
- Epigenetic mechanisms silence tumor suppressor miRNAs and activate oncogenic miRNAs.
- miRNAs themselves can induce epigenetic aberrations, further promoting cancer progression.
- Naturally occurring compounds can modulate miRNA expression via epigenetic pathways.
Conclusions:
- The crosstalk between epigenetics and ncRNAs is a critical determinant of cancer gene expression.
- Targeting these interactions offers potential therapeutic strategies for cancer treatment.
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