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A Petri Net Approach to Physiologically Based Toxicokinetic Modeling.
1Environmental Toxicology, Clemson University, Clemson, South Carolina, USA.
Physiologically based toxicokinetic (PBTK) modeling using graphical Petri nets offers an intuitive alternative to complex ordinary differential equations (ODEs). This new approach accurately predicts chemical concentrations in aquatic species, simplifying toxicological research.
Area of Science:
- Environmental toxicology
- Computational toxicology
- Aquatic toxicology
Background:
- Physiologically based toxicokinetic (PBTK) models predict chemical concentrations in tissues.
- Current PBTK models often use complex ordinary differential equations (ODEs), posing a barrier to researchers.
- Graphical modeling offers a more intuitive approach to PBTK analysis.
Purpose of the Study:
- To demonstrate the utility and ease of use of Petri nets for PBTK modeling.
- To present a Petri net PBTK model for waterborne fluoranthene exposure in rainbow trout.
- To compare the predictive functionality of a Petri net PBTK model against an existing ODE PBTK model.
Main Methods:
- Developed a PBTK model using Petri nets in Snoopy software.
- Converted an existing ODE-based PBTK model to a Petri net framework.
- Introduced and analyzed the sensitivity of the blood volume parameter (V_BLOOD).
- Simulated and compared results from both ODE and Petri net models.
Main Results:
- The Petri net PBTK model closely mirrored the results of the ODE PBTK model.
- The introduced blood volume parameter (V_BLOOD) was found to be robust.
- Petri net models offer equivalent predictive functionality to ODE models.
Conclusions:
- Petri nets provide an intuitive and effective graphical framework for PBTK modeling.
- This approach simplifies complex toxicokinetic modeling for researchers.
- Petri net PBTK models maintain predictive accuracy while offering advantages over traditional ODE methods.
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