Related Experiment Video
Updated: Jan 28, 2026

Tissue-Engineered Graft for Circumferential Esophageal Reconstruction in Rats
Published on: February 10, 2020
Changes in Clock Genes Expression in Esophagus in Rat Reflux Esophagitis
Atsushi Hashimoto1, Risa Uemura1, Akinari Sawada1
1Department of Gastroenterology, Osaka City University Graduate School of Medicine, 1-4-3 Asahimachi, Abeno-ku, Osaka, 545-8585, Japan.
Gastroesophageal reflux disease (GERD) disrupts circadian clock gene expression in the esophagus and other organs. This disruption may contribute to GERD development and highlights a link between sleep disturbances and digestive health.
Area of Science:
- Gastroenterology
- Chronobiology
- Molecular Biology
Background:
- Gastroesophageal reflux disease (GERD) is linked to sleep disturbances.
- Clock genes regulate physiological functions via circadian rhythms.
- The relationship between clock genes and GERD remains unexplored.
Purpose of the Study:
- To investigate the impact of reflux esophagitis on the circadian expression of clock genes.
- To examine clock gene variability in the esophagus and other organs in a rat model.
Main Methods:
- A rat model of reflux esophagitis was established.
- Expression of clock genes (Per1, Per2, Per3, Cry1, Cry2, Arntl, Clock) was analyzed via qPCR in esophagus, stomach, intestine, and liver.
- Serum melatonin and IL-6 levels were measured.
Main Results:
- Reflux esophagitis caused significant disruption to the circadian variability of most clock genes in the esophagus during the acute phase.
- This disruption extended to the stomach, small intestine, and liver.
- While some clock gene variability normalized in the chronic phase, others remained disrupted.
Conclusions:
- Disruption of circadian clock gene variability is associated with reflux esophagitis.
- These findings suggest a potential role for clock gene dysregulation in GERD pathogenesis.
Related Concept Videos
What is Gene Expression?
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
What is Gene Expression?
Cell Specific Gene Expression
Cell Specific Gene Expression
Esophagus
The movement of edibles from the pharynx into the esophagus is facilitated by the upper esophageal sphincter, which is formed primarily by the...
Chromatin Position Affects Gene Expression
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...

