Related Experiment Video
Updated: Jan 28, 2026

Characterizing Microbiome Dynamics – Flow Cytometry Based Workflows from Pure Cultures to Natural Communities
Published on: July 12, 2018
Dynamic graphs, community detection, and Riemannian geometry
Craig Bakker1, Mahantesh Halappanavar1, Arun Visweswara Sathanur1
1Pacific Northwest National Laboratory, 902 Battelle Boulevard, Richland, 99352 WA United States.
Abstract:
A community is a subset of a wider network where the members of that subset are more strongly connected to each other than they are to the rest of the network. In this paper, we consider the problem of identifying and tracking communities in graphs that change over time - dynamic community detection - and present a framework based on Riemannian geometry to aid in this task. Our framework currently supports several important operations such as interpolating between and averaging over graph snapshots. We compare these Riemannian methods with entry-wise linear interpolation and find that the Riemannian methods are generally better suited to dynamic community detection. Next steps with the Riemannian framework include producing a Riemannian least-squares regression method for working with noisy data and developing support methods, such as spectral sparsification, to improve the scalability of our current methods.
Related Concept Videos
Coordination Number and Geometry
Predicting Molecular Geometry
What are Populations and Communities?
Ogive Graph
Graphing Antiderivatives
Bar Graph

