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Published on: August 14, 2018
First report of molecular characterization and phylogenetic analysis of Sarcocystis tenella from India
Vikrant Sudan1, Rahul Kumar2, Daya Shanker2
1College of Veterinary Sciences &Animal Husbandry, U. P. Pandit Deen Dayal Upadhyaya Pashu Chikitsa Vigyan Vishwavidyalaya Evam Go Anusandhan Sansthan (DUVASU), Mathura, 281001, India. viks.sudan@gmail.com.
Abstract:
Sarcocystis tenella is a common tissue coccidian parasite of sheep. It is reported worldwide with high prevalence rate ranging from 9 to 100%. However, there are very limited reports of this parasite from the Indian context and those reports are totally based on the morphology alone. When it comes to molecular characterization, such studies are absent from India. The present communication reports the first characterization study of S. tenella from India. 18S rRNA ribosomal gene and mitochondrial cytochrome c oxidase subunit I (cox1) genes were used for molecular characterization and phylogenetic analysis alongside standard histopathology of sarcocysts. Five Indian isolates were characterized for each gene, and respective sequences were submitted in the NCBI. Two haplotypes were noticed, both for the 18S rRNA and cox1 gene showing 99.8-100.0% and 99.7-100.0% nucleotide homologies within themselves, respectively. When compared with other sequences of S. tenella across the globe, the present isolates showed 93.3-99.9% nucleotide homology based on 18S rRNA gene and 95.2-99.8% nucleotide homology based on cox1 gene, respectively. In both the 18S and cox1 phylogenetic trees, respective sequences of S. tenella were placed with monophyletic cluster which was sister to a cluster comprising of sequences of S. gracilis and S. alces.
Insights
This study presents the first molecular characterization of Sarcocystis tenella in India using ribosomal 18S rRNA and mitochondrial cox1 genes. Findings reveal genetic diversity within Indian isolates and their relationship to global Sarcocystis tenella populations.
Area of Science:
- Veterinary Parasitology
- Molecular Biology
- Ovine Pathology
Background:
- Sarcocystis tenella is a widespread coccidian parasite affecting sheep globally, with high prevalence rates.
- Existing Indian reports on S. tenella rely solely on morphology, lacking molecular data.
- This study addresses the gap in molecular characterization of S. tenella in the Indian subcontinent.
Purpose of the Study:
- To perform the first molecular characterization of Sarcocystis tenella from India.
- To analyze genetic diversity using 18S rRNA and mitochondrial cox1 genes.
- To conduct phylogenetic analysis and compare Indian isolates with global strains.
Main Methods:
- Molecular characterization of five Indian S. tenella isolates using 18S rRNA and mitochondrial cox1 genes.
- Sequencing and submission of genetic data to NCBI.
- Phylogenetic analysis alongside standard histopathology of sarcocysts.
Main Results:
- Identification of two haplotypes for both 18S rRNA and cox1 genes within Indian isolates.
- High nucleotide homology (99.8-100.0% for 18S rRNA, 99.7-100.0% for cox1) among Indian isolates.
- Significant nucleotide homology (93.3-99.9% for 18S rRNA, 95.2-99.8% for cox1) with global S. tenella sequences.
- Phylogenetic analysis placed Indian S. tenella with a monophyletic cluster, sister to S. gracilis and S. alces.
Conclusions:
- This study provides the foundational molecular data for Sarcocystis tenella in India.
- The genetic analysis reveals diversity within Indian isolates and confirms their relationship to global populations.
- The findings contribute to a better understanding of Sarcocystis epidemiology and evolution in sheep.
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