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Updated: Jan 27, 2026

Acyl-PEGyl Exchange Gel Shift Assay for Quantitative Determination of Palmitoylation of Brain Membrane Proteins
Published on: March 29, 2020
The dual roles of RPE65 S-palmitoylation in membrane association and visual cycle function
Sheetal Uppal1, Tingting Liu1,2, Eugenia Poliakov1
1Laboratory of Retinal Cell and Molecular Biology, National Eye Institute, National Institutes of Health, Bethesda, MD, 20892, United States.
Abstract:
Association with the endoplasmic reticulum (ER) membrane is a critical requirement for the catalytic function of RPE65. Several studies have investigated the nature of the RPE65-membrane interaction; however, complete understanding of its mode of membrane binding is still lacking. Previous biochemical studies suggest the membrane interaction can be partly attributed to S-palmitoylation, but the existence of RPE65 palmitoylation remains a matter of debate. Here, we re-examined RPE65 palmitoylation, and its functional consequence in the visual cycle. We clearly demonstrate that RPE65 is post-translationally modified by a palmitoyl moiety, but this is not universal (about 25% of RPE65). By extensive mutational studies we mapped the S-palmitoylation sites to residues C112 and C146. Inhibition of palmitoylation using 2-bromopalmitate and 2-fluoropalmitate completely abolish its membrane association. Furthermore, palmitoylation-deficient C112 mutants are significantly impeded in membrane association. Finally, we show that RPE65 palmitoylation level is highly regulated by lecithin:retinol acyltransferase (LRAT) enzyme. In the presence of all-trans retinol, LRAT substrate, there is a significant decrease in the level of palmitoylation of RPE65. In conclusion, our findings suggest that RPE65 is indeed a dynamically-regulated palmitoylated protein and that palmitoylation is necessary for regulating its membrane binding, and to perform its normal visual cycle function.
Insights
Retinal pigment epithelium 65 (RPE65) is palmitoylated, a modification essential for its endoplasmic reticulum membrane association and visual cycle function. This palmitoylation is regulated by the lecithin:retinol acyltransferase (LRAT) enzyme.
Area of Science:
- Biochemistry
- Molecular Biology
- Vision Science
Background:
- Endoplasmic reticulum (ER) membrane association is crucial for RPE65 catalytic activity.
- The exact mechanism of RPE65 membrane binding, particularly S-palmitoylation, remains debated.
- Understanding RPE65's membrane interaction is key to deciphering its role in the visual cycle.
Purpose of the Study:
- To re-examine RPE65 S-palmitoylation and its functional consequences in the visual cycle.
- To identify the specific sites of RPE65 palmitoylation.
- To investigate the regulation of RPE65 palmitoylation by LRAT.
Main Methods:
- Post-translational modification analysis to detect RPE65 palmitoylation.
- Extensive site-directed mutagenesis to identify palmitoylation sites (C112, C146).
- Inhibition of palmitoylation using specific chemical inhibitors (2-bromopalmitate, 2-fluoropalmitate).
- Assays to measure RPE65 membrane association in wild-type and mutant forms.
- Enzyme activity assays involving LRAT and all-trans retinol.
Main Results:
- RPE65 is confirmed to be S-palmitoylated, though not universally (approx. 25% of protein).
- Palmitoylation sites were mapped to cysteine residues C112 and C146.
- Inhibition of palmitoylation abolished RPE65 membrane association; C112 mutants showed impaired membrane binding.
- Lecithin:retinol acyltransferase (LRAT) regulates RPE65 palmitoylation, decreasing it in the presence of all-trans retinol.
Conclusions:
- RPE65 is a dynamically regulated palmitoylated protein.
- Palmitoylation is essential for RPE65's proper membrane binding and visual cycle function.
- LRAT activity modulates RPE65 palmitoylation levels, impacting its membrane association.
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