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Published on: September 26, 2018
Molecular Approach to Diagnosis of Cardiovascular Implantable Electronic Device Infection
Zerelda Esquer Garrigos1, M Rizwan Sohail1,2, Kerryl E Greenwood-Quaintance1
1Division of Infectious Diseases Mayo Clinic College of Medicine and Science, Rochester, Minnesota.
Background:
Sonicate fluid (SF), a solution derived from vortexing and sonication of explanted cardiovascular implantable electronic devices (CIEDs), is a higher-yield specimen compared with swabs or tissues for culture-based detection of microorganisms associated with CIED infection. Despite this, SF culture fails to identify a causative organism in ~50% of cases. We aimed to evaluate the diagnostic performance of 16S ribosomal RNA gene (rRNA) polymerase chain reaction (PCR)/sequencing of SF and compare it with that of SF culture.
Methods:
We identified 322 SF specimens from extracted CIEDs and reviewed clinical data for each patient. Subjects were classified as having or not having CIED infection. Cases were subcategorized as culture negative if no significant growth was reported from SF cultures and as culture positive if an organism was detected above predefined thresholds. 16S rRNA PCR/sequencing was performed, with the organisms identified reported according to Clinical and Laboratory Standards Institute guidelines for sequence data interpretation.
Results:
A total of 278 SF samples corresponded to infected cases, of which 160 were culture positive and 118 culture negative. The remaining 44 were from noninfected cases, of which 2 were culture positive. Compared with SF culture, the sensitivity of 16S rRNA PCR/sequencing was higher (64% vs 57.5%, P = .003). 16S rRNA PCR/sequencing detected a potential pathogen in 28 of 118 culture-negative cases, identifying staphylococci in the majority (18/28).
Conclusions:
16S rRNA PCR/sequencing has higher sensitivity to detect bacteria in SF from extracted CIEDs than does SF culture.
Insights
Sonicate fluid (SF) 16S ribosomal RNA gene (rRNA) polymerase chain reaction (PCR)/sequencing offers improved bacterial detection in cardiovascular implantable electronic devices (CIEDs) compared to traditional SF culture. This molecular method enhances the identification of pathogens in culture-negative cases, improving CIED infection diagnostics.
Area of Science:
- Cardiovascular medicine
- Infectious disease diagnostics
- Molecular microbiology
Background:
- Cardiovascular implantable electronic device (CIED) infections pose significant clinical challenges.
- Sonicate fluid (SF) is a promising specimen for diagnosing CIED infections, but culture methods often fail to detect causative organisms.
- A substantial proportion of CIED infections remain culture-negative, necessitating improved diagnostic approaches.
Purpose of the Study:
- To evaluate the diagnostic performance of 16S ribosomal RNA gene (rRNA) polymerase chain reaction (PCR)/sequencing for detecting microorganisms in SF.
- To compare the sensitivity of 16S rRNA PCR/sequencing with conventional SF culture for CIED infection diagnosis.
Main Methods:
- Analysis of 322 SF specimens from explanted CIEDs.
- Classification of cases into infected and non-infected groups based on clinical data.
- Comparison of results from 16S rRNA PCR/sequencing with SF culture findings.
Main Results:
- 16S rRNA PCR/sequencing demonstrated higher sensitivity (64%) compared to SF culture (57.5%) in detecting bacteria (P = .003).
- The molecular method identified pathogens in 28 of 118 culture-negative cases, predominantly staphylococci.
- A total of 278 SF samples were from infected cases, with 160 culture-positive and 118 culture-negative.
Conclusions:
- 16S rRNA PCR/sequencing is a more sensitive method for detecting bacteria in SF from explanted CIEDs than SF culture.
- This molecular technique improves the diagnosis of CIED infections, particularly in culture-negative scenarios.
- Enhanced pathogen identification via 16S rRNA PCR/sequencing can guide more effective treatment strategies for CIED infections.
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