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C9orf72 hexanucleotide repeat length in older population: normal variation and effects on cognition.
Karri Kaivola1, Anna Kiviharju1, Lilja Jansson1
1Molecular Neurology, Research Programs Unit, Department of Neurology, University of Helsinki, Helsinki University Hospital, Helsinki, Finland.
The C9orf72 hexanucleotide repeat expansion is linked to neurodegenerative diseases. This study found that repeat lengths between 30-45 are not pathogenic and intermediate alleles do not associate with Alzheimer's disease or cognitive impairment.
Area of Science:
- Genetics
- Neuroscience
- Neurology
Background:
- The hexanucleotide repeat expansion in C9orf72 is a known cause of amyotrophic lateral sclerosis/frontotemporal dementia.
- The precise pathogenic repeat length threshold and the clinical significance of intermediate repeat lengths remain unclear.
Purpose of the Study:
- To determine the repeat length distribution of C9orf72 in a large Finnish cohort.
- To investigate the clinical significance of intermediate and expanded C9orf72 repeat lengths.
Main Methods:
- Genotyping of C9orf72 repeat length in 3142 older Finnish individuals (aged 60-104 years).
- Analysis of disease associations for different repeat length categories.
Main Results:
- The longest non-expanded allele observed was 45 repeats.
- Alleles with 30-45 repeats (0.38%) showed no association with neurodegenerative or psychiatric diseases.
- Intermediate length alleles (7-45 and 20-45 repeats) did not correlate with Alzheimer's disease or cognitive impairment.
- Six individuals carried expansions (>45 repeats), with four diagnosed with neurodegenerative or psychiatric conditions, but none with ALS/FTD.
Conclusions:
- Repeat lengths of 30-45 in C9orf72 are unlikely to be pathogenic.
- Intermediate C9orf72 repeat lengths do not appear to be associated with Alzheimer's disease or cognitive impairment in this cohort.
- While rare expansions exist, their direct link to ALS/FTD requires further investigation.
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