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Updated: Jan 26, 2026

Author Spotlight: A Computational Pipeline for Analyzing Chimeric Noncoding RNA-Target RNA Interactions in High-Throughput Sequencing Data
Published on: December 1, 2023
A noncoding RNA LINC00504 interacts with c-Myc to regulate tumor metabolism in colon cancer
Jinfeng Feng1, Jun Ma1, Shaoqun Liu1
1Department of General Surgery, Minhang Hospital, Fudan University, Shanghai, China.
Abstract:
Accumulating evidence has shown a critical role of long-non-coding RNAs (lncRNAs) during multiple tumor progression. However, the potential functions of LINC00504 in colon cancer as well as its mechanisms remain obscure. By lncRNA profiling, we identified LINC00504 as a novel oncogenic lncRNA in colon cancer. The lncRNA LINC00504 was markedly upregulated in colon cancer cell lines and specimens. LINC00504 increases viability and migration of colon cells in vitro. Furthermore, LINC00504 also enhances colon cancer xenograft tumors in vivo. We noted that LINC00504 regulates metabolism at a transcriptional level which influences multiple metabolic pathways, such as glucose metabolism, pentose phosphate pathway, and tricarboxylic acid cycle. Mechanistic study showed that LINC00504 could interact with c-Myc to promote chromatin recruitment of c-Myc and enhance its transactivation activity. Collectively, our results showed that LINC00504 serves as an important transcriptional regulator for c-Myc in colon cancer cells. LINC00504 can reprogram central metabolism in colon cancer cells implying that LINC00504 may serve as a potential target for therapeutic intervention.
Insights
Long non-coding RNA LINC00504 promotes colon cancer growth by regulating metabolism. It interacts with c-Myc, suggesting LINC00504 as a potential therapeutic target for colon cancer.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Long non-coding RNAs (lncRNAs) play roles in tumor progression.
- The function and mechanism of LINC00504 in colon cancer are largely unknown.
Purpose of the Study:
- To investigate the role of LINC00504 in colon cancer.
- To elucidate the underlying mechanisms of LINC00504 action.
Main Methods:
- lncRNA profiling to identify LINC00504.
- In vitro assays (viability, migration) and in vivo xenograft models.
- Mechanistic studies involving c-Myc interaction and transcriptional regulation.
Main Results:
- LINC00504 is upregulated in colon cancer tissues and cell lines.
- LINC00504 enhances colon cancer cell viability, migration, and tumor growth.
- LINC00504 regulates metabolic pathways by interacting with c-Myc and enhancing its activity.
Conclusions:
- LINC00504 acts as an oncogenic lncRNA in colon cancer.
- LINC00504 reprograms cancer cell metabolism via c-Myc.
- LINC00504 represents a potential therapeutic target for colon cancer treatment.
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