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Updated: Dec 18, 2025

Patient-Derived Tumor Explants As a "Live" Preclinical Platform for Predicting Drug Resistance in Patients
Published on: February 7, 2021
Drug resistance: origins, evolution and characterization of genomic clones and the tumor ecosystem to optimize
Ioannis D Kyrochristos1, Demosthenes E Ziogas2, Dimitrios H Roukos3
1Centre for Biosystems and Genome Network Medicine, Ioannina University, Ioannina, Greece; Department of Surgery, Ioannina University Hospital, Ioannina, Greece.
Abstract:
Progress in understanding and overcoming fatal intrinsic and acquired resistance is slow, with only a few exceptions. Despite advances in modern genome and transcriptome analysis, the controversy of the three different theories on drug resistance and tumor progression, namely dynamic intratumor heterogeneity, pre-existing minor genomic clones and tumor ecosystem, is unresolved. Moreover, evidence on transcriptional heterogeneity suggests the necessity of a drug bank for individualized, precise drug-sensitivity prediction. We propose a cancer type- and stage-specific clinicogenomic and tumor ecosystemic concept toward cancer precision medicine, focusing on early therapeutic resistance and relapse.
Insights
Overcoming cancer drug resistance remains challenging. This study proposes a new precision medicine approach integrating genomics and tumor ecosystems to predict and combat early treatment resistance and relapse.
Area of Science:
- Oncology
- Genomics
- Cancer Biology
Background:
- Understanding and overcoming cancer drug resistance, both intrinsic and acquired, is a significant clinical challenge.
- Current genomic and transcriptomic analyses have not resolved the debate on major theories of drug resistance and tumor progression.
- Transcriptional heterogeneity indicates a need for personalized drug sensitivity prediction.
Purpose of the Study:
- To propose a novel cancer precision medicine framework.
- To address early therapeutic resistance and cancer relapse.
- To integrate clinicogenomic data with tumor ecosystemic concepts.
Main Methods:
- Developing a cancer type- and stage-specific concept.
- Focusing on clinicogenomic and tumor ecosystemic factors.
- Analyzing evidence on transcriptional heterogeneity.
Main Results:
- The study proposes a new conceptual framework for precision medicine.
- It highlights the need for individualized drug sensitivity prediction.
- It emphasizes the importance of considering tumor ecosystems.
Conclusions:
- A cancer type- and stage-specific clinicogenomic and tumor ecosystemic approach is proposed for precision medicine.
- This framework aims to improve the prediction and management of early therapeutic resistance and relapse.
- Further research is needed to validate and implement this integrated concept.
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08:59Looking for Driver Pathways of Acquired Resistance to Targeted Therapy: Drug Resistant Subclone Generation and Sensitivity Restoring by Gene Knock-down
Published on: December 11, 2017
08:46Implementation of In Vitro Drug Resistance Assays: Maximizing the Potential for Uncovering Clinically Relevant Resistance Mechanisms
Published on: December 9, 2015
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