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Updated: Jan 25, 2026

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Identification of potentially druggable molecular alterations in skin adnexal malignancies
Stefano Cavalieri1, Adele Busico2, Iolanda Capone2
1Head and Neck Medical Oncology Unit, Fondazione IRCCS Istituto Nazionale dei Tumori di Milano, Milan, Italy.
Abstract:
Skin adnexal cancers (SAC) are a heterogeneous group of rare malignancies with histological differentiation towards epithelial adnexa, which lack effective systemic treatments. The aim of this work is to identify any potentially druggable genomic alterations for possible targeted therapies. Cases of primary or recurrent/metastatic (RM) SAC between 2002 and 2014 were identified by searching the institutional cancer registration database. Histological sections of all referral cases were reviewed by a dedicated pathologist to confirm diagnosis. Immunohistochemistry was performed to assess the expression of androgen receptors (AR) and human epidermal growth factor receptor type 2 (HER2). Targeted next-generation sequencing (T-NGS) was performed to identify targetable mutations (panel of 50 genes analyzed by Cancer Hotspot Panel, Ion-Torrent Personal Genome Machine). Mutational analysis of the PTCH1 gene not present in the T-NGS panel was assessed by Sanger sequencing. A total of 45 cases with available histological samples were identified (35 primary, 10 RM). The most frequent histological type was porocarcinoma (n = 12). Globally, 14 cases (31%) were AR+ (6/10 RM, 60%; 8/35 primary, 23%). HER2 was shown as 2+ in eight of 42 (19%) cases (2/9 RM, 22%; 6/33 primary, 18%). DNA was adequate for T-NGS analysis in 25 cases. In the majority of cases (17 cases, 68%) at least one mutation in oncogenes or tumor suppressor genes was found: the most frequent ones involved TP.53 (13 cases, 76% of mutated SAC) and PIK3CA (three cases, 18%). The rate of PTCH1 mutation was 30%. These findings support the use of molecular screening in patients with advanced SAC.
Insights
Genomic profiling of rare skin adnexal cancers (SAC) revealed actionable mutations in 68% of cases, including TP53 and PIK3CA. This supports molecular screening for targeted therapies in advanced SAC patients.
Area of Science:
- Oncology
- Genomics
- Dermatology
Background:
- Skin adnexal cancers (SAC) are rare malignancies lacking effective systemic treatments.
- Identifying druggable genomic alterations is crucial for developing targeted therapies.
Purpose of the Study:
- To identify potentially targetable genomic alterations in skin adnexal cancers (SAC).
- To evaluate the frequency of mutations in key oncogenes and tumor suppressor genes.
Main Methods:
- Histopathological review and immunohistochemistry for androgen receptors (AR) and HER2.
- Targeted next-generation sequencing (T-NGS) of 50 genes and Sanger sequencing for PTCH1.
- Analysis of 45 primary or recurrent/metastatic (RM) SAC cases diagnosed between 2002 and 2014.
Main Results:
- 31% of SAC cases were AR-positive, and 19% showed HER2 expression.
- T-NGS identified mutations in 68% of analyzed cases, with TP53 (76%) and PIK3CA (18%) being most frequent.
- PTCH1 mutations were found in 30% of cases.
Conclusions:
- These findings highlight the potential for targeted therapies based on molecular profiling in SAC.
- Molecular screening is recommended for patients with advanced SAC to guide treatment decisions.
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