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Published on: June 30, 2014
DNA methylation signatures of monozygotic twins clinically discordant for multiple sclerosis
Nicole Y Souren1, Lisa A Gerdes2, Pavlo Lutsik3
1Department of Genetics/Epigenetics, Saarland University, 66123, Saarbrücken, Germany. nicole.souren@hotmail.com.
Abstract:
Multiple sclerosis (MS) is an inflammatory, demyelinating disease of the central nervous system with a modest concordance rate in monozygotic twins, which strongly argues for involvement of epigenetic factors. We observe highly similar peripheral blood mononuclear cell-based methylomes in 45 MS-discordant monozygotic twins. Nevertheless, we identify seven MS-associated differentially methylated positions (DMPs) of which we validate two, including a region in the TMEM232 promoter and ZBTB16 enhancer. In CD4 + T cells we find an MS-associated differentially methylated region in FIRRE. Additionally, 45 regions show large methylation differences in individual pairs, but they do not clearly associate with MS. Furthermore, we present epigenetic biomarkers for current interferon-beta treatment, and extensive validation shows that the ZBTB16 DMP is a signature for prior glucocorticoid treatment. Taken together, this study represents an important reference for epigenomic MS studies, identifies new candidate epigenetic markers, and highlights treatment effects and genetic background as major confounders.
Insights
Epigenetic factors play a role in multiple sclerosis (MS). This study found specific DNA methylation differences in MS patients, some linked to treatments, highlighting epigenomics in MS research.
Area of Science:
- Neuroimmunology
- Epigenetics
- Genomics
Background:
- Multiple sclerosis (MS) is a central nervous system inflammatory disease.
- Its modest concordance in identical twins suggests a role for epigenetic factors.
- Understanding these factors is crucial for MS research.
Purpose of the Study:
- To investigate epigenetic differences, specifically DNA methylation, in monozygotic twins discordant for MS.
- To identify potential epigenetic biomarkers associated with MS and its treatments.
- To establish a reference for future epigenomic studies in MS.
Main Methods:
- Analysis of methylomes in peripheral blood mononuclear cells from 45 MS-discordant monozygotic twin pairs.
- Identification and validation of differentially methylated positions (DMPs) and regions.
- Correlation analysis of methylation patterns with MS status and treatment history (interferon-beta, glucocorticoids).
Main Results:
- Highly similar methylomes were observed between co-twins, indicating a strong genetic influence.
- Seven MS-associated DMPs were identified, with two validated: a TMEM232 promoter region and a ZBTB16 enhancer.
- An MS-associated differentially methylated region in FIRRE was found in CD4+ T cells.
- Epigenetic signatures for interferon-beta and glucocorticoid treatments were identified, with ZBTB16 DMP linked to prior glucocorticoid use.
Conclusions:
- Epigenetic modifications, particularly DNA methylation, are relevant in the pathogenesis of MS.
- Specific DMPs, like ZBTB16, may serve as biomarkers for treatment history.
- Genetic background and treatment confounders must be considered in epigenomic MS research.
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