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Updated: Jan 24, 2026

Super-Resolution Imaging of Bacterial Secreted Proteins Using Genetic Code Expansion
Published on: February 10, 2023
Bacterial range expansions on a growing front: Roughness, fixation, and directed percolation
Jordan M Horowitz1,2,3, Mehran Kardar4
1Physics of Living Systems Group, Department of Physics, Massachusetts Institute of Technology, 400 Technology Square, Cambridge, Massachusetts 02139, USA.
Abstract:
Directed percolation (DP) is a classic model for nonequilibrium phase transitions into a single absorbing state (fixation). It has been extensively studied by analytical and numerical techniques in diverse contexts. Recently, DP has appeared as a generic model for the evolutionary and ecological dynamics of competing bacterial populations. Range expansion-the stochastic reproduction of bacteria competing for space to be occupied by their progeny-leads to a fluctuating and rough growth front, which is known from experiment and simulation to affect the underlying critical behavior of the DP transition. In this work, we employ symmetry arguments to construct a pair of nonlinear stochastic partial differential equations describing the coevolution of surface roughness with the composition field of DP. Macroscopic manifestations (phenomenology) of these equations on growth patterns and genealogical tracks of range expansion are discussed; followed by a renormalization group analysis of possible scaling behaviors at the DP transition.
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