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Improving data splitting for classification applications in spectrochemical analyses employing a random-mutation
Camilo L M Morais1, Marfran C D Santos2, Kássio M G Lima2
1School of Pharmacy and Biomedical Sciences, University of Central Lancashire, Preston PR1 2HE, UK.
Bioinformatics (Oxford, England)
|May 23, 2019
Summary
A new data splitting algorithm, Morais-Lima-Martin (MLM), improves classification model performance in biomedical applications. MLM offers better predictive accuracy and balanced sensitivity and specificity compared to random selection (RS) and Kennard-Stone (KS) methods.
Area of Science:
- Biomedical data analysis
- Machine learning for spectral data
- Chemometrics
Background:
- Data splitting is crucial for building robust classification models using spectral data in biomedical applications.
- Common data splitting techniques include random selection (RS) and Kennard-Stone (KS) algorithms.
- These methods divide samples into training and testing sets for model construction and validation.
Purpose of the Study:
- To introduce the Morais-Lima-Martin (MLM) algorithm as an improved method for data splitting in classification tasks.
- To evaluate the performance of the MLM algorithm against existing RS and KS methods.
Main Methods:
- The proposed Morais-Lima-Martin (MLM) algorithm modifies the Kennard-Stone (KS) algorithm by incorporating a random-mutation factor.
- Performance comparison involved simulated data and six real-world biospectroscopic datasets.
- Classification models were built using principal component analysis and linear discriminant analysis (PCA-LDA).
Main Results:
- The MLM algorithm demonstrated superior predictive performance compared to RS and KS algorithms.
- MLM resulted in more balanced classification outcomes, particularly in terms of sensitivity and specificity.
- RS yielded the poorest predictive results, while KS showed good accuracy but unbalanced sensitivity and specificity.
Conclusions:
- The Morais-Lima-Martin (MLM) algorithm shows significant potential as an advanced sample selection method for spectral data classification.
- MLM offers enhanced predictive capabilities and balanced performance metrics over traditional data splitting techniques.
- The MLM algorithm is available for MATLAB users.
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