Related Experiment Video
Updated: Jan 23, 2026

Measuring In Vitro ATPase Activity for Enzymatic Characterization
Published on: August 23, 2016
A Mn-sensing riboswitch activates expression of a Mn2+/Ca2+ ATPase transporter in Streptococcus
Julia E Martin1, My T Le2, Nabin Bhattarai1
1Department of Biological Sciences, Idaho State University, Pocatello, ID 83209, USA.
Abstract:
Maintaining manganese (Mn) homeostasis is important for the virulence of numerous bacteria. In the human respiratory pathogen Streptococcus pneumoniae, the Mn-specific importer PsaBCA, exporter MntE, and transcriptional regulator PsaR establish Mn homeostasis. In other bacteria, Mn homeostasis is controlled by yybP-ykoY family riboswitches. Here, we characterize a yybP-ykoY family riboswitch upstream of the mgtA gene encoding a PII-type ATPase in S. pneumoniae, suggested previously to function in Ca2+ efflux. We show that the mgtA riboswitch aptamer domain adopts a canonical yybP-ykoY structure containing a three-way junction that is compacted in the presence of Ca2+ or Mn2+ at a physiological Mg2+ concentration. Although Ca2+ binds to the RNA aptamer with higher affinity than Mn2+, in vitro activation of transcription read-through of mgtA by Mn2+ is much greater than by Ca2+. Consistent with this result, mgtA mRNA and protein levels increase ≈5-fold during cellular Mn stress, but only in genetic backgrounds of S. pneumoniae and Bacillus subtilis that exhibit Mn2+ sensitivity, revealing that this riboswitch functions as a failsafe 'on' signal to prevent Mn2+ toxicity in the presence of high cellular Mn2+. In addition, our results suggest that the S. pneumoniae yybP-ykoY riboswitch functions to regulate Ca2+ efflux under these conditions.
Insights
This study reveals a manganese riboswitch in Streptococcus pneumoniae that prevents toxicity by increasing MgtA expression during manganese stress. This manganese homeostasis mechanism acts as a failsafe to protect bacteria from excess manganese.
Area of Science:
- Microbiology
- Molecular Biology
- Bacterial Pathogenesis
Background:
- Manganese (Mn) homeostasis is crucial for bacterial virulence.
- Streptococcus pneumoniae utilizes PsaBCA, MntE, and PsaR for Mn homeostasis.
- Manganese homeostasis is often regulated by yybP-ykoY riboswitches in bacteria.
Purpose of the Study:
- To characterize a yybP-ykoY riboswitch controlling the mgtA gene in Streptococcus pneumoniae.
- To investigate the role of this riboswitch in response to manganese and calcium ions.
- To understand the mechanism of manganese toxicity prevention in S. pneumoniae.
Main Methods:
- Structural analysis of the mgtA riboswitch aptamer domain.
- In vitro transcription assays to assess riboswitch activation by Ca2+ and Mn2+.
- Measurement of mgtA mRNA and protein levels under cellular manganese stress in wild-type and mutant strains.
Main Results:
- The mgtA riboswitch adopts a canonical yybP-ykoY structure, compacted by Ca2+ or Mn2+.
- Mn2+ activates mgtA transcription read-through more effectively than Ca2+, despite lower binding affinity.
- mgtA expression increases significantly under Mn stress in Mn2+-sensitive strains, indicating a protective role.
Conclusions:
- The characterized riboswitch functions as a failsafe to prevent Mn2+ toxicity by upregulating MgtA.
- This mechanism is essential in S. pneumoniae and Bacillus subtilis strains sensitive to Mn2+.
- The S. pneumoniae riboswitch may also play a role in regulating Ca2+ efflux.
Related Concept Videos
Riboswitches
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
Secondary Active Transport
Secondary Active Transport
Primary Active Transport
Primary Active Transport
Active Transport
Primary active transporters, like Na+, K+ and -ATPase, directly utilize ATP to move ions across the membrane. These transporters play significant roles in various physiological processes. For instance, Na+, K+ and -ATPase maintain...

