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Published on: June 6, 2025
IRF5 promoter methylation as a new potential marker of rheumatoid arthritis
Marek Cieśla1, Bogdan Kolarz1, Maria Majdan2
1Institute of Clinical and Experimental Medicine, Faculty of Medicine, University of Rzeszów, Rzeszów, Poland
Abstract:
Introduction: The interferon regulatory factor 5 (IRF5) gene is implicated in the toll‑like receptor signaling pathway and has proinflammatory and chemotactic effects, but its role in the pathogenesis of rheumatoid arthritis (RA) remains unclear. Since the pathobiology of RA shares some similarities with other autoimmune diseases, we tested the hypothesis that RA may be associated with IRF5‑related pathways, as has been reported for systemic lupus erythematosus and Sjögren syndrome. Objectives: The aim of the study was to investigate the association between the presence of methylation in the IRF5 promoter and the morbidity and severity of RA as well as with levels of inflammatory markers. Patients and methods: A total of 146 unrelated individuals, 122 patients with RA and 24 healthy controls, were enrolled in the study. All RA patients were genotyped with regard to the following polymorphisms in the IRF5 gene: rs10488631, T>C and rs4728142 G>A. The methylation analysis included 52 patients with RA and 24 healthy controls. A quantitative real‑time methylation‑specific polymerase chain reaction was used to evaluate methylation status. Results: We found differences between patients with RA and healthy controls in the methylation pattern of the promoter region. The methylation level was 43.6% lower in RA patients than in controls (median [interquartile range], 0.79 [0.6-1.13] vs 1.4 [1.16-1.66]; P = 0.0001). Variant rs4728142 G>A was more common in seronegative patients with RA. Conclusions: The methylation profile of the IRF5 promoter may be used as a new potential marker of RA, which is independent of current criteria of disease activity.
Insights
Rheumatoid arthritis (RA) patients show altered interferon regulatory factor 5 (IRF5) promoter methylation. This IRF5 methylation pattern may serve as a novel biomarker for RA, independent of disease activity measures.
Area of Science:
- Immunology
- Genetics
- Rheumatology
Background:
- Interferon regulatory factor 5 (IRF5) is involved in toll-like receptor signaling and inflammation.
- The role of IRF5 in rheumatoid arthritis (RA) pathogenesis is not fully understood.
- Similarities in pathobiology between RA and other autoimmune diseases suggest a potential link to IRF5.
Purpose of the Study:
- To investigate the association between IRF5 promoter methylation and RA morbidity and severity.
- To examine the correlation between IRF5 methylation and inflammatory markers in RA patients.
Main Methods:
- Genotyping of IRF5 polymorphisms (rs10488631, rs4728142) in 122 RA patients and 24 controls.
- Quantitative real-time methylation-specific PCR to assess IRF5 promoter methylation in 52 RA patients and 24 controls.
Main Results:
- Significant differences in IRF5 promoter methylation patterns were observed between RA patients and healthy controls.
- RA patients exhibited a 43.6% lower methylation level in the IRF5 promoter compared to controls (P = 0.0001).
- The IRF5 variant rs4728142 G>A was more prevalent in seronegative RA patients.
Conclusions:
- IRF5 promoter methylation represents a potential novel biomarker for rheumatoid arthritis.
- This methylation profile may offer an independent marker for RA, distinct from current disease activity assessments.
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