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Author Spotlight: Advancing Structural and Biochemical Studies of Proteins Through Thermal Shift Assays
Published on: August 9, 2024
A temperature-dependent conformational shift in p38α MAPK substrate-binding region associated with changes in
Daniel Deredge1, Patrick L Wintrode1, Mohan E Tulapurkar2
1Department of Pharmaceutical Sciences, University of Maryland School of Pharmacy, Baltimore, Maryland 21201.
Febrile-range hyperthermia worsens lung injury, while hypothermia mitigates it. This study reveals temperature-dependent structural and functional changes in the proinflammatory p38-alpha mitogen-activated protein kinase (MAPK), impacting its interaction with MK2.
Area of Science:
- Molecular biology
- Cellular signaling
- Biophysics
Background:
- Body temperature influences acute lung injury severity, with hyperthermia worsening and hypothermia mitigating the condition.
- p38 mitogen-activated protein kinase (MAPK) inhibitors blunt this temperature dependence, suggesting a role for p38 MAPK isoforms.
- p38α is proinflammatory, while p38β is cytoprotective, indicating isoform-specific functions in temperature-related lung injury.
Purpose of the Study:
- To investigate the temperature dependence of p38 MAPK activation, substrate interaction, and tertiary structure.
- To elucidate the specific roles of p38α and p38β isoforms in temperature-mediated cellular responses.
- To understand how temperature affects the interaction between p38α and its substrate MAPK-activated kinase-2 (MK2).
Main Methods:
- HeLa cells were incubated at varying temperatures (33 °C, 37 °C, 39.5 °C).
- In vitro kinase assays were used to measure substrate phosphorylation by p38α and p38β.
- Surface plasmon resonance (SPR) assessed p38α:substrate binding affinity.
- Hydrogen-deuterium exchange mass spectrometry (HDX-MS) analyzed temperature-dependent conformational changes in p38α and p38β.
Main Results:
- Incubating cells at 39.5 °C modestly stimulated p38 activation but did not alter TNFα-induced activation.
- MK2 phosphorylation by activated p38α was 14.5-fold greater at 39.5 °C compared to 33 °C.
- HDX-MS revealed temperature-dependent conformational changes in p38α near the MK2 binding site, but not in p38β.
- p38α:substrate binding affinity showed temperature dependence mirroring substrate phosphorylation.
Conclusions:
- The proinflammatory p38α isoform exhibits significant temperature-dependent changes in its structure and function, particularly in its interaction with MK2.
- These temperature-dependent alterations in p38α may contribute to the observed worsening of lung injury during fever.
- The cytoprotective p38β isoform does not show similar temperature-dependent conformational changes, highlighting isoform-specific thermal sensitivity.
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