Related Experiment Video
Updated: Jan 22, 2026

Precise Phage Mutagenesis with NgTET-Assisted CRISPR-Cas Systems
Published on: October 14, 2025
Phages and Human Health: More Than Idle Hitchhikers
Dylan Lawrence1,2, Megan T Baldridge3,4, Scott A Handley5,6
1Division of Infectious Diseases, Department of Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA. dylan.lawrence@wustl.edu.
Abstract:
Bacteriophages, or phages, are viruses that infect bacteria and archaea. Phages have diverse morphologies and can be coded in DNA or RNA and as single or double strands with a large range of genome sizes. With the increasing use of metagenomic sequencing approaches to analyze complex samples, many studies generate massive amounts of "viral dark matter", or sequences of viral origin unable to be classified either functionally or taxonomically. Metagenomic analysis of phages is still in its infancy, and uncovering novel phages continues to be a challenge. Work over the past two decades has begun to uncover key roles for phages in different environments, including the human gut. Recent studies in humans have identified expanded phage populations in both healthy infants and in inflammatory bowel disease patients, suggesting distinct phage activity during development and in specific disease states. In this review, we examine our current knowledge of phage biology and discuss recent efforts to improve the analysis and discovery of novel phages. We explore the roles phages may play in human health and disease and discuss the future of phage research.
Insights
Bacteriophages (phages) are viruses infecting bacteria. Analyzing phage DNA from complex samples reveals "viral dark matter," challenging discovery, yet phages play key roles in human health and disease.
Area of Science:
- Microbiology
- Virology
- Bioinformatics
Background:
- Bacteriophages (phages) are viruses that infect bacteria and archaea, exhibiting diverse morphologies and genetic material.
- Metagenomic sequencing generates substantial unclassified viral sequences, termed "viral dark matter."
- Phage analysis is evolving, with growing evidence of their roles in the human gut microbiome.
Purpose of the Study:
- To review current knowledge of phage biology and analysis methods.
- To highlight recent advancements in novel phage discovery.
- To explore the significance of phages in human health and disease.
Main Methods:
- Review of existing literature on phage biology and metagenomics.
- Analysis of recent studies on phage populations in human gut samples.
- Discussion of emerging techniques for phage identification and characterization.
Main Results:
- Metagenomic approaches yield significant amounts of unclassified viral sequences.
- Phage populations vary between healthy infants and inflammatory bowel disease patients.
- Phages are increasingly recognized for their critical roles in various environments, including the human gut.
Conclusions:
- Improved methods are crucial for analyzing and discovering novel phages.
- Phages significantly influence human health and disease states.
- Future research directions in phage biology and application are promising.
Related Concept Videos
Health Literacy
Purpose of Health Records I
Here's a breakdown of how health records serve these purposes:
Purpose of Health Records II
Health Information Technology and Healthcare Information System
Health Information Technology, commonly called HIT, integrates advanced information systems and technology in healthcare settings. Its primary functions include:
Concepts of Health and Illness
Dimensions of Health and Illness

