Joint analysis of heterogeneous single-cell RNA-seq dataset collections
Related Experiment Video
Updated: Jan 22, 2026

Tissue Collection and RNA Extraction from the Human Osteoarthritic Knee Joint
Published on: July 22, 2021
Nikolas Barkas1, Viktor Petukhov1,2, Daria Nikolaeva1
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Abstract:
Single-cell RNA sequencing is often applied in study designs that include multiple individuals, conditions or tissues. To identify recurrent cell subpopulations in such heterogeneous collections, we developed Conos, an approach that relies on multiple plausible inter-sample mappings to construct a global graph connecting all measured cells. The graph enables identification of recurrent cell clusters and propagation of information between datasets in multi-sample or atlas-scale collections.
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