Characterization of the full-length human Grb7 protein and a phosphorylation representative mutant
Andrew M Bradford1, Rajan Koirala2, Chad K Park3
1Pharmaceutics Development, Agena Bioscience, San Diego, CA, USA.
Abstract:
It is well known the dimerization state of receptor tyrosine kinases (RTKs), in conjunction with binding partners such as the growth factor receptor bound protein 7 (Grb7) protein, plays an important role in cell signaling regulation. Previously, we proposed, downstream of RTKs, that the phosphorylation state of Grb7SH2 domain tyrosine residues could control Grb7 dimerization, and dimerization may be an important regulatory step in Grb7 binding to RTKs. In this manner, additional dimerization-dependent regulation could occur downstream of the membrane-bound kinase in RTK-mediated signaling pathways. Extrapolation to the full-length (FL) Grb7 protein, and the ability to test this hypothesis further, has been hampered by the availability of large quantities of pure and stable FL protein. Here, we report the biophysical characterization of the FL Grb7 protein and also a mutant representing a tyrosine-phosphorylated Grb7 protein form. Through size exclusion chromatography and analytical ultracentrifugation, we show the phosphorylated-tyrosine-mimic Y492E-FL-Grb7 protein (Y492E-FL-Grb7) is essentially monomeric at expected physiological concentrations. It has been shown previously the wild-type FL Grb7(WT-FLGrb7) protein is dimeric with a dissociation constant (Kd) of approximately 11μM. Our studies here measure a FL protein dimerization Kd of WT-FL-Grb7 within one order of magnitude at approximately 1μM. The approximate size and shape of the WT-FL-Grb7 in comparison the tyrosine-phosphorylation mimic Y492E-FL-Grb7 protein was determined by dynamic light scattering methods. In vitro phosphorylation of the Grb7SH2 domain indicates only one of the available tyrosine residues is phosphorylated, suggesting the same phosphorylation pattern could be relevant in the FL protein. The biophysical characterization studies in total are interpreted with a view towards understanding the functionally active Grb7 protein conformation.
Insights
Receptor tyrosine kinase (RTK) signaling is regulated by Grb7 protein dimerization. Phosphorylation of Grb7 causes it to become monomeric, impacting RTK-mediated pathways and cell signaling.
Area of Science:
- Cellular signaling
- Protein biophysics
- Molecular biology
Background:
- Receptor tyrosine kinases (RTKs) and their binding partners, like the growth factor receptor bound protein 7 (Grb7), are crucial for cell signaling.
- Grb7 dimerization is hypothesized to be regulated by tyrosine phosphorylation of its SH2 domain, influencing its binding to RTKs.
- Previous studies were limited by the lack of pure, stable full-length (FL) Grb7 protein for comprehensive analysis.
Purpose of the Study:
- To biophysically characterize the full-length (FL) Grb7 protein and a mutant mimicking tyrosine phosphorylation.
- To investigate the dimerization state of wild-type (WT) FL Grb7 and the Y492E-FL-Grb7 mutant under physiological conditions.
- To elucidate the role of Grb7 phosphorylation in regulating its conformation and function within RTK signaling pathways.
Main Methods:
- Size exclusion chromatography (SEC) to assess protein size and oligomeric state.
- Analytical ultracentrifugation (AUC) to determine protein molecular weight and quaternary structure.
- Dynamic light scattering (DLS) to measure protein size and shape.
- In vitro phosphorylation assays to identify specific phosphorylation sites on the Grb7 SH2 domain.
Main Results:
- The Y492E-FL-Grb7 mutant, mimicking tyrosine phosphorylation, was found to be predominantly monomeric at physiological concentrations.
- Wild-type FL Grb7 (WT-FLGrb7) was confirmed to be dimeric, with a measured dissociation constant (Kd) of approximately 1μM, an order of magnitude tighter than previously reported.
- DLS analysis provided insights into the comparative size and shape of WT-FL-Grb7 and the monomeric Y492E-FL-Grb7 mutant.
- In vitro phosphorylation studies indicated that only one tyrosine residue in the Grb7 SH2 domain is phosphorylated.
Conclusions:
- Tyrosine phosphorylation of Grb7, specifically at Y492, promotes a monomeric conformation, suggesting a switch in dimerization state.
- The tighter dimerization constant for WT-FL-Grb7 (1μM) compared to previous estimates highlights the importance of accurate biophysical characterization.
- These findings provide a foundation for understanding how Grb7 phosphorylation regulates its conformation and function in RTK signaling.
- The identification of a single phosphorylated tyrosine residue suggests a specific regulatory mechanism controlling Grb7 activity.
Related Concept Videos
Phosphorylation
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
The Representativeness Heuristic
Conservation of Protein Domains Over Different Proteins
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
Protein Kinases and Phosphatases
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Role of Proteins in the Human Body
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...


