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A 1.5 Hour Procedure for Identification of Enterococcus Species Directly from Blood Cultures
Published on: February 10, 2011
Identification and evaluation of quercetin as a potential inhibitor of naphthoate synthase from Enterococcus faecalis
Satyajeet Das1, Sagar Batra1, Pramodkumar P Gupta2
1Amity Institute of Biotechnology, Amity University Rajasthan, Jaipur, India.
Abstract:
Enterococcus faecalis is a gram-positive, rod-shape bacteria responsible for around 65% to 80% of all enterococcal nosocomial infections. It is multidrug resistant (MDR) bacterium resistant to most of the first-line antibiotics. Due to the emergence of MDR strains, there is an urgent need to find novel targets to develop new antibacterial drugs against E. faecalis. In this regard, we have identified naphthoate synthase (1,4-dihydroxy-2-naphthoyl-CoA synthase, EC: 4.1.3.36; DHNS) as an anti-E. faecalis target, as it is an essential enzyme for menaquinone (vitamin K2 ) synthetic pathway in the bacterium. Thus, inhibiting naphtholate synthase may consequently inhibit the bacteria's growth. In this regard, we report here cloning, expression, purification, and preliminary structural studies of naphthoate synthase along with in silico modeling, molecular dynamic simulation of the model and docking studies of naphthoate synthase with quercetin, a plant alkaloid. Biochemical studies have indicated quercetin, a plant flavonoid as the potential lead compound to inhibit catalytic activity of EfDHNS. Quercetin binding has also been validated by spectrofluorimetric studies in order to confirm the bindings of the ligand compound with EfDHNS at ultralow concentrations. Reported studies may provide a base for structure-based drug development of antimicrobial compounds against E. faecalis.
Insights
Researchers identified naphthoate synthase as a key target to combat multidrug-resistant Enterococcus faecalis infections. Quercetin shows potential as an inhibitor, offering a new avenue for developing antibacterial drugs against this common pathogen.
Area of Science:
- Microbiology
- Biochemistry
- Drug Discovery
Background:
- Enterococcus faecalis is a major cause of nosocomial infections, often exhibiting multidrug resistance (MDR).
- The emergence of MDR strains necessitates the identification of novel therapeutic targets and antibacterial agents.
- Naphthoate synthase (DHNS) is essential for menaquinone (vitamin K2) synthesis in E. faecalis, making it a promising drug target.
Purpose of the Study:
- To identify and characterize naphthoate synthase (DHNS) as a potential anti-E. faecalis target.
- To investigate quercetin as a potential inhibitor of DHNS activity.
- To provide a foundation for structure-based drug development against E. faecalis.
Main Methods:
- Cloning, expression, and purification of E. faecalis naphthoate synthase (EfDHNS).
- In silico modeling, molecular dynamics simulation, and docking studies of EfDHNS with quercetin.
- Biochemical and spectrofluorimetric assays to evaluate quercetin's inhibitory effect and binding affinity.
Main Results:
- Naphthoate synthase (DHNS) was successfully cloned, expressed, purified, and structurally studied.
- In silico analyses predicted quercetin as a potential inhibitor of EfDHNS.
- Biochemical and spectrofluorimetric data confirmed quercetin's ability to inhibit EfDHNS activity and bind to the enzyme at low concentrations.
Conclusions:
- Naphthoate synthase is a validated anti-E. faecalis target.
- Quercetin is a promising lead compound for developing new antibacterial drugs against E. faecalis.
- This study lays the groundwork for structure-based drug design targeting E. faecalis infections.
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