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CRISPR Tools for Systematic Studies of RNA Regulation
Jesse Engreitz1,2, Omar Abudayyeh1,3, Jonathan Gootenberg1,4
1Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142.
Cold Spring Harbor Perspectives in Biology
|August 3, 2019
Summary
Clustered regularly interspaced short palindromic repeat (CRISPR)-based technologies are revolutionizing RNA biology research. These tools offer new ways to study RNA regulation, modifications, and functions in mammalian cells, advancing functional genomics.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- RNA molecules are crucial for gene expression and cellular regulation in mammals.
- Traditional methods for studying RNA function are limited.
- CRISPR-Cas systems offer novel approaches for genetic and RNA-based perturbations.
Purpose of the Study:
- To review the application of CRISPR-based technologies in understanding RNA regulation.
- To highlight the impact of these tools on functional genomics and RNA biology.
- To discuss emerging RNA-targeting CRISPR systems for direct RNA manipulation.
Main Methods:
- Review of CRISPR-Cas fundamentals and functional genomics applications.
- Exploration of CRISPR-based perturbations for studying DNA regulatory elements and long noncoding RNAs (lncRNAs).
- Discussion of RNA-targeting CRISPR-Cas enzymes for RNA modification and function analysis.
Main Results:
- CRISPR technologies provide powerful tools for directed DNA and RNA perturbations.
- These systems are transforming the study of RNA regulation and function.
- Emerging RNA-targeting CRISPR enzymes promise to accelerate RNA biology research.
Conclusions:
- CRISPR-based tools are essential for systematic investigation of RNA function and regulation.
- The development of RNA-targeting CRISPR systems opens new avenues in RNA biology.
- These advancements enable deeper insights into the complex roles of RNA in mammalian cells.
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