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Updated: Jan 21, 2026

Conformational Evaluation of HIV-1 Trimeric Envelope Glycoproteins Using a Cell-based ELISA Assay
Published on: September 14, 2014
Analysis of HIV-1 Matrix-Envelope Cytoplasmic Tail Interactions
Ayna Alfadhli1, August O Staubus1, Philip R Tedbury2
1Department of Molecular Microbiology and Immunology, Oregon Health & Sciences University, Portland, Oregon, USA.
Abstract:
The matrix (MA) domains of HIV-1 precursor Gag (PrGag) proteins direct PrGag proteins to plasma membrane (PM) assembly sites where envelope (Env) protein trimers are incorporated into virus particles. MA targeting to PM sites is facilitated by its binding to phosphatidylinositol-(4,5)-bisphosphate [PI(4,5)P2], and MA binding to cellular RNAs appears to serve a chaperone function that prevents MA from associating with intracellular membranes prior to arrival at the PI(4,5)P2-rich PM. Investigations have shown genetic evidence of an interaction between MA and the cytoplasmic tails (CTs) of Env trimers that contributes to Env incorporation into virions, but demonstrations of direct MA-CT interactions have proven more difficult. In direct binding assays, we show here that MA binds to Env CTs. Using MA mutants, matrix-capsid (MACA) proteins, and MA proteins incubated in the presence of inositol polyphosphate, we show a correlation between MA trimerization and CT binding. RNA ligands with high affinities for MA reduced MA-CT binding levels, suggesting that MA-RNA binding interferes with trimerization and/or directly or indirectly blocks MA-CT binding. Rough-mapping studies indicate that C-terminal CT helices are involved in MA binding and are in agreement with cell culture studies with replication-competent viruses. Our results support a model in which full-length HIV-1 Env trimers are captured in assembling PrGag lattices by virtue of their binding to MA trimers.IMPORTANCE The mechanism by which HIV-1 envelope (Env) protein trimers assemble into virus particles is poorly understood but involves an interaction between Env cytoplasmic tails (CTs) and the matrix (MA) domain of the structural precursor Gag (PrGag) proteins. We show here that direct binding of MA to Env CTs correlates with MA trimerization, suggesting models where MA lattices regulate CT interactions and/or MA-CT trimer-trimer associations increase the avidity of MA-CT binding. We also show that MA binding to RNA ligands impairs MA-CT binding, potentially by interfering with MA trimerization and/or directly or allosterically blocking MA-CT binding sites. Rough mapping implicated CT C-terminal helices in MA binding, in agreement with cell culture studies on MA-CT interactions. Our results indicate that targeting HIV-1 MA-CT interactions may be a promising avenue for antiviral therapy.
Insights
The HIV-1 matrix protein directly binds to envelope protein tails, crucial for virus assembly. This interaction is regulated by matrix protein trimerization and can be disrupted by RNA, offering potential antiviral targets.
Area of Science:
- Virology
- Molecular Biology
- Structural Biology
Background:
- HIV-1 precursor Gag (PrGag) proteins target viral assembly to the plasma membrane.
- The matrix (MA) domain of PrGag binds phosphatidylinositol-(4,5)-bisphosphate [PI(4,5)P2] at the plasma membrane.
- Cellular RNAs may chaperone MA, preventing premature association with intracellular membranes.
Purpose of the Study:
- To investigate the direct binding interaction between the HIV-1 MA domain and the cytoplasmic tails (CTs) of Env trimers.
- To elucidate the role of MA trimerization and RNA binding in MA-CT interactions.
- To identify regions of Env CTs involved in MA binding.
Main Methods:
- Direct binding assays to demonstrate MA-CT interaction.
- Use of MA mutants, matrix-capsid (MACA) proteins, and inositol polyphosphate to study MA trimerization and CT binding.
- Assessment of RNA ligand effects on MA-CT binding.
- Rough-mapping studies to identify CT regions involved in MA binding.
Main Results:
- Direct binding assays confirmed that MA binds to Env CTs.
- MA-CT binding correlated with MA trimerization, suggesting MA lattices regulate CT interactions.
- High-affinity RNA ligands reduced MA-CT binding, indicating interference with MA trimerization or direct/indirect blocking of binding sites.
- C-terminal helices of Env CTs were implicated in MA binding.
Conclusions:
- HIV-1 Env trimers are captured in assembling PrGag lattices via binding to MA trimers.
- MA trimerization is a key factor in mediating MA-CT interactions.
- MA-RNA interactions can negatively regulate MA-CT binding, potentially via disruption of MA trimerization.
- Targeting MA-CT interactions represents a promising strategy for developing novel antiviral therapies against HIV-1.
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