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Updated: Jan 20, 2026

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Published on: June 13, 2019
An intriguing relationship between teleost Rex3 retroelement and environmental temperature
Federica Carducci1, Maria Assunta Biscotti1, Mariko Forconi1
1Dipartimento di Scienze della Vita e dell'Ambiente, Università Politecnica delle Marche, via Brecce Bianche, 60131 Ancona, Italy.
Transposable elements (TEs) like Rex3 retroelements in teleost fish show distinct sequence evolution based on environmental temperature. This study reveals Rex3 variants cluster by water temperature, linking genome evolution to climate adaptation.
Area of Science:
- Genomics
- Evolutionary Biology
- Molecular Biology
Background:
- Transposable elements (TEs) significantly shape host genomes, influencing architecture and size.
- TEs are sensitive to environmental changes, but their sequence evolution in response to conditions like temperature is poorly understood.
- Teleost fish, with diverse environmental adaptations and rich TE content, offer a model for studying TE-environment correlations.
Purpose of the Study:
- To investigate the correlation between environmental temperature and the sequence evolution of the Rex3 retroelement in teleost fish.
- To determine if Rex3 retroelement variants cluster based on the adaptation of teleost species to different thermal environments.
Main Methods:
- Phylogenetic analysis of partial reverse transcriptase sequences from the Rex3 retroelement.
- Comparative sequence analysis across 39 teleost species representing diverse thermal habitats.
Main Results:
- Rex3 retroelement sequences from teleost species inhabiting cold waters clustered together.
- Rex3 retroelement sequences from teleost species inhabiting warm waters also showed distinct clustering.
- This suggests a correlation between Rex3 retroelement sequence evolution and environmental temperature.
Conclusions:
- The study provides the first evidence linking environmental temperature to the evolutionary patterns of the Rex3 retroelement in teleosts.
- Rex3 retroelement variants may evolve in response to thermal adaptation, highlighting TEs as indicators of environmental influence on genome evolution.
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