Related Concept Videos

Reusable Single Cell for Iterative Epigenomic Analyses10:28

Reusable Single Cell for Iterative Epigenomic Analyses

The present protocol describes a single-cell method for iterative epigenomic analyses using a reusable single cell. The reusable single cell allows analyses of multiple epigenetic marks in the same single cell and statistical validation of the results.
1.7K
CRISPR Epigenome Editing in Human Cells using Plasmid DNA Transfection and mRNA Nucleofection Delivery07:49

CRISPR Epigenome Editing in Human Cells using Plasmid DNA Transfection and mRNA Nucleofection Delivery

The protocol describes methods for Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-based epigenome editing in human cell lines using plasmid DNA transfection and mRNA...
2.3K
Cell-Specific Paired Interrogation of the Mouse Ovarian Epigenome and Transcriptome12:25

Cell-Specific Paired Interrogation of the Mouse Ovarian Epigenome and Transcriptome

In this protocol, the translating ribosome affinity purification (TRAP) method and the isolation of nuclei tagged in specific cell types (INTACT) method were optimized for the paired interrogation of the cell-specific ovarian transcriptome and epigenome using the NuTRAP mouse model crossed to a Cyp17a1-Cre mouse...
1.2K
A Multiple Integrated Social Stress Model for Psychiatric Disorders in Female C57BL/6J Mice06:15

A Multiple Integrated Social Stress Model for Psychiatric Disorders in Female C57BL/6J Mice

By integrating four daily social stressors, the present study describes a multiple integrated social stress (MISS) model for psychiatric disorders in female C57BL/6J mice. After ten days of repeated MISS exposure, the mice developed depressive- and anxiety-like phenotypes, thus providing a natural, etiology-based animal model for studying psychiatric disorders in female...
1.2K
Developing a Behavioral Box for Assessing Prepulse Inhibition and Neural Activity in Psychiatric Animal Models06:55

Developing a Behavioral Box for Assessing Prepulse Inhibition and Neural Activity in Psychiatric Animal Models

This protocol presents a microcontroller-based behavioral box to assess prepulse inhibition (PPI) by collecting acceleration data from a sensor beneath the box. This data evaluates sensory gating deficits in socially isolated rats, with an added method for synchronizing data with neuronal activity to advance neurophysiology studies on behavioral...
687
Pattern-based Search of Epigenomic Data Using GeNemo06:38

Pattern-based Search of Epigenomic Data Using GeNemo

Unlike DNA sequence data, epigenomic data are not readily subjected to text-based searches. Presented here are the procedures to use an upgraded version of GeNemo, a web-based bioinformatics tool, to conduct pattern-based searches for similarities in epigenomic data comparing available online databases including Encyclopedia of DNA Elements with user's...
5.4K