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Updated: Jan 19, 2026

One-step CRISPR-based Strategy for Endogenous Gene Tagging in Drosophila melanogaster
Published on: January 26, 2024
Endogenous Fluorescence Tagging by CRISPR
Hassan Bukhari1, Thorsten Müller2
1Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA; Department of Molecular Biochemistry, Cell Signalling, Ruhr-University Bochum, Bochum, Germany.
This review details CRISPR gene editing for fluorescent protein knock-ins, enhancing live cell imaging. It covers homology-directed repair and other strategies for efficient marker integration in biomedical research.
Area of Science:
- Biomedical Research
- Molecular Biology
- Genetics
Background:
- Fluorescent proteins enable live cell imaging without fixation.
- Current methods facilitate rapid integration of fluorescent markers into endogenous genes.
Purpose of the Study:
- To review gene editing technologies for fluorescent protein knock-ins.
- To focus on CRISPR-Cas9 strategies for marker integration.
- To discuss advancements and future perspectives in fluorescent protein applications.
Main Methods:
- Overview of zinc finger nucleases (ZFNs), transcription activator-like effectors (TALENs), and CRISPR.
- Detailed examination of CRISPR-based strategies: homology-directed repair (HDR), microhomology-mediated end joining (MMEJ), and nonhomologous end joining (NHEJ).
- Analysis of recent developments for highly efficient knock-in procedures.
Main Results:
- CRISPR technology offers versatile strategies (HDR, MMEJ, NHEJ) for fluorescent marker knock-in.
- Recent advancements have significantly improved the efficiency of gene editing for marker integration.
- Fluorescent protein knock-ins offer unique advantages for live cell imaging and biological studies.
Conclusions:
- CRISPR technology is a powerful tool for fluorescent protein knock-ins, advancing live cell imaging.
- Future directions include combining gene editing with organoid development for enhanced research.
- Efficient marker integration via CRISPR opens new avenues in biomedical research.
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