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Updated: Jan 19, 2026

A Fully Differentiated Macrophage Infection Model of Monocyte-Derived Cells with Mycobacterium tuberculosis
Derailing the aspartate pathway of Mycobacterium tuberculosis to eradicate persistent infection
Erik J Hasenoehrl1, Dannah Rae Sajorda1, Linda Berney-Meyer1
1Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.
Abstract:
A major constraint for developing new anti-tuberculosis drugs is the limited number of validated targets that allow eradication of persistent infections. Here, we uncover a vulnerable component of Mycobacterium tuberculosis (Mtb) persistence metabolism, the aspartate pathway. Rapid death of threonine and homoserine auxotrophs points to a distinct susceptibility of Mtb to inhibition of this pathway. Combinatorial metabolomic and transcriptomic analysis reveals that inability to produce threonine leads to deregulation of aspartate kinase, causing flux imbalance and lysine and DAP accumulation. Mtb's adaptive response to this metabolic stress involves a relief valve-like mechanism combining lysine export and catabolism via aminoadipate. We present evidence that inhibition of the aspartate pathway at different branch-point enzymes leads to clearance of chronic infections. Together these findings demonstrate that the aspartate pathway in Mtb relies on a combination of metabolic control mechanisms, is required for persistence, and represents a target space for anti-tuberculosis drug development.
Insights
Targeting the aspartate pathway in Mycobacterium tuberculosis (Mtb) offers a new strategy for anti-tuberculosis drug development. Inhibiting this essential metabolic pathway effectively clears chronic Mtb infections.
Area of Science:
- Microbiology
- Metabolic Biochemistry
- Drug Discovery
Background:
- Developing new anti-tuberculosis drugs is hindered by a lack of validated targets for persistent infections.
- Mycobacterium tuberculosis (Mtb) persistence relies on specific metabolic vulnerabilities.
- The aspartate pathway is a critical metabolic route in Mtb.
Purpose of the Study:
- To identify and validate novel drug targets within the Mtb metabolic network.
- To investigate the role of the aspartate pathway in Mtb persistence.
- To evaluate the therapeutic potential of inhibiting the aspartate pathway against chronic tuberculosis.
Main Methods:
- Combinatorial metabolomic and transcriptomic analysis of Mtb.
- Investigation of threonine and homoserine auxotrophs.
- Enzyme inhibition assays targeting aspartate pathway branch-point enzymes.
- Assessment of chronic infection clearance in vivo.
Main Results:
- The aspartate pathway is essential for Mtb persistence.
- Inhibition of threonine biosynthesis leads to metabolic dysregulation, including lysine and diaminopimelic acid (DAP) accumulation.
- Mtb employs adaptive mechanisms like lysine export and aminoadipate catabolism to manage metabolic stress.
- Targeting aspartate pathway enzymes effectively clears chronic Mtb infections.
Conclusions:
- The aspartate pathway is a crucial, yet vulnerable, metabolic network in Mtb.
- Mtb utilizes complex metabolic control mechanisms to maintain persistence.
- The aspartate pathway represents a promising target space for novel anti-tuberculosis drug development.
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