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Influence of pixelization on height measurement in atomic force microscopy
Anna P Tolstova1, Evgeniy V Dubrovin2
1Lomonosov Moscow State University, Leninskie gory, 1/2, 119991, Russian Federation.
Ultramicroscopy
|September 24, 2019
Summary
Atomic Force Microscopy (AFM) pixelization affects height measurements of particles. Our simulations show pixel size can cause under- or overestimation of true particle dimensions, impacting nanoscience data interpretation.
Area of Science:
- Nanoscience
- Surface Science
- Materials Science
Background:
- Atomic Force Microscopy (AFM) offers high resolution for surface topography.
- Accurate height measurements of protruding features can be challenging due to AFM's raster scanning.
- Pixelization effects in AFM imaging are not fully understood, especially for particle height determination.
Purpose of the Study:
- To quantify the impact of pixelization on apparent height measurements of spherical and cylindrical particles using AFM.
- To investigate how AFM probe size influences these pixelization effects.
- To provide insights for accurate interpretation of AFM data and nanoparticle height estimation.
Main Methods:
- Utilized Monte Carlo simulations to model AFM scanning of particles.
- Varied pixel size and AFM probe dimensions in the simulations.
- Analyzed the mean apparent height (hmean) of simulated particles.
Main Results:
- Apparent height (hmean) can be an increasing or decreasing function of pixel size, depending on particle size distribution.
- AFM pixelization can lead to both under- and overestimation of true particle diameters.
- Including AFM probe size significantly increases the underestimation of particle height, up to 50%.
Conclusions:
- Pixelization in AFM introduces significant errors in height measurements, influenced by particle size and probe dimensions.
- Understanding these effects is crucial for accurate AFM data interpretation in nanoscience.
- The findings aid in estimating true nanoparticle heights from AFM images, even at low resolutions.

