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A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
Published on: May 27, 2021
Epigenetic synthetic lethality approaches in cancer therapy
Haoshen Yang1, Wei Cui2, Lihui Wang3
1Department of Pharmacology, Shenyang Pharmaceutical University, Shenyang, 110016, People's Republic of China.
Abstract:
The onset and development of malignant tumors are closely related to epigenetic modifications, and this has become a research hotspot. In recent years, a variety of epigenetic regulators have been discovered, and corresponding small molecule inhibitors have been developed, but their efficacy in solid tumors is generally poor. With the introduction of the first synthetic lethal drug (the PARP inhibitor olaparib in ovarian cancer with BRCA1 mutation), research into synthetic lethality has also become a hotspot. High-throughput screening with CRISPR-Cas9 and shRNA technology has revealed a large number of synthetic lethal pairs involving epigenetic-related synthetic lethal genes, such as those encoding SWI/SNF complex subunits, PRC2 complex subunits, SETD2, KMT2C, and MLL fusion proteins. In this review, we focus on epigenetic-related synthetic lethal mechanisms, including synthetic lethality between epigenetic mutations and epigenetic inhibitors, epigenetic mutations and non-epigenetic inhibitors, and oncogene mutations and epigenetic inhibitors.
Insights
Epigenetic modifications drive cancer, but inhibitors show limited efficacy. Synthetic lethality, particularly with epigenetic genes, offers new therapeutic strategies for solid tumors.
Area of Science:
- Oncology
- Epigenetics
- Cancer Therapeutics
Background:
- Malignant tumor development is linked to epigenetic modifications, a significant research area.
- Epigenetic regulators and inhibitors exist, yet their effectiveness in solid tumors is often inadequate.
- Synthetic lethality has emerged as a promising therapeutic strategy, highlighted by PARP inhibitors in BRCA1-mutated ovarian cancer.
Purpose of the Study:
- To review epigenetic-related synthetic lethal mechanisms.
- To explore therapeutic strategies targeting epigenetic alterations in cancer.
Main Methods:
- Review of high-throughput screening data using CRISPR-Cas9 and shRNA technology.
- Analysis of identified synthetic lethal pairs involving epigenetic genes.
Main Results:
- Numerous synthetic lethal pairs involving epigenetic regulators (e.g., SWI/SNF, PRC2, SETD2, KMT2C, MLL fusions) have been identified.
- Focus on three key synthetic lethality categories: epigenetic mutations with epigenetic inhibitors, epigenetic mutations with non-epigenetic inhibitors, and oncogene mutations with epigenetic inhibitors.
Conclusions:
- Epigenetic-related synthetic lethality presents a promising avenue for novel cancer therapies.
- Understanding these mechanisms can guide the development of more effective treatments for solid tumors.
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