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Updated: Jan 5, 2026

Simple and Fast Rolling Circle Amplification-Based Detection of Topoisomerase 1 Activity in Crude Biological Samples
Published on: December 2, 2022
Topoisomerases and cancer chemotherapy: recent advances and unanswered questions
Mary-Ann Bjornsti1, Scott H Kaufmann2
1Department of Pharmacology and Toxicology, University of Alabama at Birmingham, Birmingham, AL, 35294-0019, USA.
Abstract:
DNA topoisomerases are enzymes that catalyze changes in the torsional and flexural strain of DNA molecules. Earlier studies implicated these enzymes in a variety of processes in both prokaryotes and eukaryotes, including DNA replication, transcription, recombination, and chromosome segregation. Studies performed over the past 3 years have provided new insight into the roles of various topoisomerases in maintaining eukaryotic chromosome structure and facilitating the decatenation of daughter chromosomes at cell division. In addition, recent studies have demonstrated that the incorporation of ribonucleotides into DNA results in trapping of topoisomerase I (TOP1)-DNA covalent complexes during aborted ribonucleotide removal. Importantly, such trapped TOP1-DNA covalent complexes, formed either during ribonucleotide removal or as a consequence of drug action, activate several repair processes, including processes involving the recently described nuclear proteases SPARTAN and GCNA-1. A variety of new TOP1 inhibitors and formulations, including antibody-drug conjugates and PEGylated complexes, exert their anticancer effects by also trapping these TOP1-DNA covalent complexes. Here we review recent developments and identify further questions raised by these new findings.
Insights
DNA topoisomerases (TOPs) are crucial enzymes for DNA management. Recent research reveals how trapped topoisomerase I (TOP1) complexes, especially during DNA repair or drug action, activate cellular repair pathways.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- DNA topoisomerases regulate DNA topology crucial for replication, transcription, and chromosome segregation.
- Recent studies highlight topoisomerase I (TOP1) roles in eukaryotic chromosome structure and decatenation.
- The incorporation of ribonucleotides into DNA can trap TOP1-DNA covalent complexes.
Purpose of the Study:
- To review recent advancements in understanding topoisomerase function, particularly TOP1.
- To explore the activation of DNA repair processes by trapped TOP1-DNA covalent complexes.
- To discuss novel TOP1 inhibitors and their mechanisms of action.
Main Methods:
- Literature review of studies published within the last three years.
- Analysis of research on ribonucleotide incorporation and its effect on TOP1.
- Examination of the role of nuclear proteases SPARTAN and GCNA-1 in repair pathways.
Main Results:
- Trapped TOP1-DNA covalent complexes, arising from ribonucleotide removal or drug action, activate DNA repair.
- Nuclear proteases SPARTAN and GCNA-1 are involved in these repair processes.
- New TOP1 inhibitors, including antibody-drug conjugates, function by trapping TOP1-DNA complexes.
Conclusions:
- Recent findings provide new insights into the roles of topoisomerases in maintaining genome stability.
- Trapped TOP1-DNA complexes are key mediators of DNA repair and drug-induced cytotoxicity.
- Further research is needed to fully elucidate the complexities of topoisomerase function and inhibition.
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