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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Published on: May 6, 2022
Physical Activity and Genome-wide DNA Methylation: The REgistre GIroní del COR Study
Alba Fernández-Sanlés, Sergi Sayols-Baixeras, Manuel Castro DE Moura1
1Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Catalonia, SPAIN.
Physical activity (PA) influences DNA methylation. This study found two CpG sites with nonlinear associations with moderate-to-vigorous PA (MVPA), suggesting a dose-response relationship for health benefits.
Area of Science:
- Epigenetics
- Genomics
- Human Health
Background:
- DNA methylation is a potential mechanism linking physical activity (PA) to health benefits.
- Understanding genome-wide DNA methylation patterns associated with PA is crucial.
Purpose of the Study:
- To investigate the association between physical activity and genome-wide DNA methylation at the CpG level.
- To identify specific CpG sites differentially methylated in response to varying levels of physical activity.
Main Methods:
- A two-stage epigenome-wide association study design was employed.
- Meta-analysis of linear and nonlinear associations across three independent populations (total n = 2408).
- Physical activity was assessed using validated questionnaires and categorized into light, moderate, vigorous, and total PA.
Main Results:
- Two CpG sites exhibited a statistically significant nonlinear association with moderate-to-vigorous PA (MVPA).
- CpG cg24155427 (chromosome 1) and cg09565397 (chromosome 8, within DGAT1) were identified.
- These sites have prior associations with smoking, lupus, aging, and triacylglycerol synthesis.
Conclusions:
- Identified two novel CpG sites with a nonlinear dose-response relationship to MVPA.
- These findings warrant further validation and research into the biological mechanisms of PA's health benefits.
- The identified CpG sites may serve as biomarkers for PA-related health outcomes.
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