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Deep learning predicts extreme preterm birth from electronic health records
Cheng Gao1, Sarah Osmundson2, Digna R Velez Edwards3
1Department of Biomedical Informatics, School of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Journal of Biomedical Informatics
|November 4, 2019
Summary
Deep learning models accurately predict extreme preterm birth (EPB) up to 8 weeks in advance using electronic health records. This advance in predicting EPB can improve resource allocation and patient care.
Area of Science:
- Medical Informatics
- Artificial Intelligence in Medicine
- Perinatal Medicine
Background:
- Extreme preterm birth (EPB), occurring before 28 weeks, causes most newborn deaths.
- Existing prediction models often focus on later preterm births.
- Predicting EPB is crucial for improving neonatal outcomes.
Purpose of the Study:
- To investigate the efficacy of deep learning models in predicting EPB.
- To leverage temporal patterns in electronic health records (EHRs) for EPB prediction.
- To compare deep learning performance against traditional machine learning models.
Main Methods:
- Recurrent neural networks (RNNs) were employed to analyze EHR data, incorporating word embedding for temporal relations.
- Ensemble methods combined multiple RNN models for enhanced EPB prediction.
- Models were trained and evaluated using a large dataset of deliveries, with undersampling techniques applied due to EPB's low prevalence.
Main Results:
- RNN ensemble models trained on balanced data achieved superior performance (AUC 0.827, sensitivity 0.965) compared to models trained on imbalanced data and traditional machine learning methods.
- The RNN ensemble models outperformed the best baseline models (AUC 0.777, sensitivity 0.819).
- Identified risk factors for EPB included twin pregnancy, short cervical length, hypertensive disorders, systemic lupus erythematosus, and hydroxychloroquine sulfate.
Conclusions:
- Temporal deep learning models demonstrate significant potential for predicting EPB.
- Accurate EPB prediction can be achieved up to 8 weeks prior to birth.
- Early prediction enables effective healthcare resource allocation and timely patient care for extreme preterm births.

