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Updated: Jan 4, 2026

Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation
Published on: June 21, 2016
A gene regulatory network to control EMT programs in development and disease
Hassan Fazilaty1,2, Luciano Rago1,3, Khalil Kass Youssef1
1Instituto de Neurociencias (CSIC-UMH), Avda. Ramón y Cajal s/n, Sant Joan d', Alacant, 03550, Spain.
Snail1 and Prrx1 expression is complementary, regulated by a feedback loop involving microRNAs. This gene network controls cell plasticity during development and disease, impacting cancer prognosis.
Area of Science:
- Molecular Biology
- Developmental Biology
- Cancer Research
Background:
- Epithelial to Mesenchymal Transition (EMT) is crucial for cell plasticity in development and disease.
- EMT is orchestrated by transcription factors (EMT-TFs) like Snail, Zeb, Twist, and Prrx, often activated by TGF-β.
- Snail1 and Prrx1 expression correlates with distinct clinical outcomes and stem-like properties in cancer.
Purpose of the Study:
- To investigate the regulatory relationship between Snail1 and Prrx1 during EMT.
- To elucidate the molecular mechanism underlying the complementary expression patterns of Snail1 and Prrx1.
- To understand the role of this regulatory network in controlling EMT programs in development and disease.
Main Methods:
- Analysis of gene expression patterns during vertebrate development and in cancer.
- In vitro and in vivo validation of gene regulatory interactions.
- Investigation of feedback loops involving transcription factors and microRNAs (miR-15 family).
Main Results:
- Snail1 and Prrx1 exhibit complementary expression patterns.
- A feedback loop was identified where Snail1 represses Prrx1, and Prrx1 activates miR-15 to attenuate Snail1.
- This network establishes hierarchical temporal expression of Snail1 and Prrx1 during EMT.
Conclusions:
- The Snail1-Prrx1 feedback loop, involving microRNAs, governs EMT dynamics.
- This regulatory mechanism provides a switch for different EMT programs.
- Findings have significant implications for understanding development and cancer progression.
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