LIR motifs and the membrane-targeting domain are complementary in the function of RavZ

Sang-Won Park1, Yong-Woo Jun1, Pureum Jeon2

  • 1Department of Ecological Science, College of Ecology and Environment, Kyungpook National University, Sangju 37224, Korea.

BMB Reports
|November 15, 2019
PubMed

Insights

The bacterial protein RavZ inhibits host autophagy by removing mammalian ATG8 proteins from membranes. Both its LIR motifs and membrane-targeting domain contribute to this function through complementary, independent pathways.

Area of Science:

  • Cell Biology
  • Microbiology
  • Molecular Biology

Background:

  • Legionella pneumophila uses the RavZ effector protein to inhibit host autophagy.
  • RavZ disrupts autophagy by irreversibly deconjugating mammalian ATG8 (mATG8) proteins from autophagosome membranes.
  • The specific roles of LIR motifs within RavZ in its function were previously unclear.

Purpose of the Study:

  • To investigate the roles of LIR motifs and the membrane-targeting (MT) domain in the function of the bacterial effector protein RavZ.
  • To elucidate the mechanisms by which RavZ inhibits host autophagy.

Main Methods:

  • Utilized RavZ mutants lacking mATG8 binding or the MT domain.
  • Assessed the ability of wild-type and mutant RavZ to delipidate mATG8-phosphatidylethanolamine (PE).

Main Results:

  • A RavZ mutant unable to bind mATG8 efficiently delipidated mATG8-PE.
  • A RavZ mutant lacking the MT domain showed reduced selective delipidation of mATG8-PE compared to wild-type RavZ.
  • Both LIR motifs and the MT domain contribute to RavZ's overall function.

Conclusions:

  • The LIR motifs and MT domain of RavZ play complementary roles in inhibiting host autophagy.
  • These domains appear to function through independent pathways to regulate RavZ activity.
  • RavZ's inhibition of autophagy involves both direct mATG8 interaction and membrane association.

Related Concept Videos

Rab Cascades01:25

Rab Cascades

Rab GTPases act in a regulated cascade during membrane fusion, helping the lipid bilayers mix. The Rab family of proteins are active when bound to GTP, and inactive when bound to GDP. Hence, they act as guanine nucleotide-dependent molecular switches. Rab-GTP recognizes and binds to long or short-range tethering proteins to capture the target vesicle. These tethers coordinate with SNAREs on the vesicle and the target membrane to assemble the trans SNARE complex that locks the mixing bilayers.
3.4K
Rab Proteins01:14

Rab Proteins

Rab proteins constitute the largest family of monomeric GTPases, of which 70 members are present in humans. Rab proteins and their effectors regulate consecutive stages of vesicle transport such as vesicle transport, docking, and fusion to the correct recipient membrane.
Rab proteins switch between a cytosolic, GDP-bound inactive state and a membrane-anchored, GTP-bound active state. By themselves, Rabs show slow rates of GDP/GTP exchange and GTP hydrolysis. Thus, Rab proteins are considered...
4.9K
Membrane Domains01:18

Membrane Domains

The membrane domains concentrate specific lipids and proteins at one place within the membrane, which helps in cell signaling, adhesion, and other critical cellular processes. These domains can differ in size, composition, function, and lifespan.
Protein Domains
The membrane comprises a group of distinct proteins responsible for carrying out a cell's specific function. For example, the plasma membrane of the human sperm, or a single germ cell, contains a unique set of proteins in the...
6.9K
Mechanisms of Membrane Domain Formation00:59

Mechanisms of Membrane Domain Formation

Different physical properties of lipids and proteins allow them to localize and form distinct islands or domains in the membrane. Some membrane domains are formed due to protein-protein interactions, whereas others are formed due to the presence of specific lipids such as sphingolipids and sterols—for example, large proteins, such as bacteriorhodopsin, aggregate and create distinct domains.
Another mechanism for membrane domain formation involves membrane proteins interacting with...
3.7K
Membrane Fluidity01:26

Membrane Fluidity

Membrane fluidity is explained by the fluid mosaic model of the cell membrane, which describes the plasma membrane structure as a mosaic of components—including phospholipids, cholesterol, proteins, and carbohydrates—that gives the membrane a fluid character.
Mosaic nature of the membrane
The mosaic characteristic of the membrane helps the plasma membrane remain fluid. The integral proteins and lipids exist as separate but loosely-attached molecules in the membrane. The membrane is...
14.3K
Intralumenal Vesicles and Multivesicular Bodies01:38

Intralumenal Vesicles and Multivesicular Bodies

Intraluminal vesicles (ILVs) are small vesicles 50-80 nm in diameter formed during the maturation of early endosomes. A specialized endosome containing numerous ILVs is called a multivesicular body (MVB). ILVs contain internalized molecules such as antigens, nucleic acids, proteins, and metabolites. Some of these molecules are released from the MVBs inside exosomes and are transported to other cells. Other MVBs contain molecules that are retained in the ILVs and are later degraded within the...
4.6K