Related Experiment Video
Updated: Jan 3, 2026

Quantitative Magnetic Resonance Imaging of Skeletal Muscle Disease
Published on: December 18, 2016
T1 -corrected quantitative chemical shift-encoded MRI
Xiaoke Wang1,2, Timothy J Colgan1, Louis A Hinshaw1,2
1Department of Radiology, University of Wisconsin, Madison, Wisconsin.
A new MRI method improves liver fat quantification by correcting for T1 effects, reducing bias and enhancing accuracy. This variable flip angle-chemical-shift encoded MRI (VFA-CSE-MRI) shows promise for precise proton density fat-fraction (PDFF) measurements.
Area of Science:
- Medical Imaging
- Magnetic Resonance Imaging
- Quantitative MRI
Background:
- Proton density fat-fraction (PDFF) quantification is crucial for assessing liver conditions.
- Traditional chemical-shift encoded MRI (CSE-MRI) methods can be susceptible to noise and bias, particularly T1-related inaccuracies.
- Improving the accuracy and reliability of PDFF measurements is essential for clinical diagnosis and research.
Purpose of the Study:
- To develop and validate a T1-corrected CSE-MRI technique for improved PDFF quantification.
- To enhance noise performance and reduce bias in liver fat fraction measurements.
- To assess the feasibility of the new method in a clinical setting.
Main Methods:
- Development of a variable flip angle (VFA)-CSE-MRI method with joint-fit reconstruction.
- Evaluation using computer simulations and phantom experiments to investigate bias sources.
- Comparison of noise performance between VFA-CSE-MRI and low flip angle (LFA)-CSE-MRI.
- Prospective pilot study in patients undergoing liver MRI to quantify PDFF before and after contrast administration.
Main Results:
- VFA-CSE-MRI demonstrated accuracy and insensitivity to B1 inhomogeneities in simulations and phantoms.
- Joint-fit reconstruction eliminated T1-related bias and offered marginal noise improvement compared to LFA-CSE-MRI.
- Pilot study in 25 patients showed strong correlation and agreement between VFA-CSE-MRI and LFA-CSE-MRI PDFF measurements pre- and post-contrast.
- High R-squared values (0.97 and 0.93) and good agreement were observed in patient data.
Conclusions:
- Joint-fit VFA-CSE-MRI is a feasible method for T1-corrected PDFF quantification in the liver.
- The method is robust against B1 inhomogeneities and effectively eliminates T1 bias.
- While offering marginal SNR advantages for typical liver T1 values, it significantly improves quantitative accuracy.
Related Concept Videos
NMR Spectroscopy: Chemical Shift Overview
For instance, the proton...
Magnetic Resonance Imaging
Chemical Shift: Internal References and Solvent Effects
The internal reference compound generally used in NMR spectroscopy is tetramethylsilane (TMS). TMS is preferred because it is chemically inert, soluble in NMR solvents, and easily removable. Also, the highly shielded methyl protons in TMS yield an intense...
Proton (¹H) NMR: Chemical Shift
Absorption signals of all the protium nuclei...
¹H NMR Chemical Shift Equivalence: Enantiotopic and Diastereotopic Protons
In chiral compounds such as 2-butanol, replacing the methylene hydrogens at C3 produces a pair of...
¹H NMR Chemical Shift Equivalence: Homotopic and Heterotopic Protons

