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Targeting Excessive EZH1 and EZH2 Activities for Abnormal Histone Methylation and Transcription Network in Malignant
Makoto Yamagishi1, Makoto Hori1, Dai Fujikawa2
1Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Tokyo, Japan.
Abstract:
Although global H3K27me3 reprogramming is a hallmark of cancer, no effective therapeutic strategy for H3K27me3-high malignancies harboring EZH2WT/WT has yet been established. We explore epigenome and transcriptome in EZH2WT/WT and EZH2WT/Mu aggressive lymphomas and show that mutual interference and compensatory function of co-expressed EZH1 and EZH2 rearrange their own genome-wide distribution, thereby establishing restricted chromatin and gene expression signatures. Direct comparison of leading compounds introduces potency and a mechanism of action of the EZH1/2 dual inhibitor (valemetostat). The synthetic lethality is observed in all lymphoma models and primary adult T cell leukemia-lymphoma (ATL) cells. Opposing actions of EZH1/2-polycomb and SWI/SNF complexes are required for facultative heterochromatin formation. Inactivation of chromatin-associated genes (ARID1A, SMARCA4/BRG1, SMARCB1/SNF5, KDM6A/UTX, BAP1, KMT2D/MLL2) and oncovirus infection (HTLV-1, EBV) trigger EZH1/2 perturbation and H3K27me3 deposition. Our study provides the mechanism-based rationale for chemical dual targeting of EZH1/2 in cancer epigenome.
Insights
Targeting EZH1 and EZH2 with dual inhibitors like valemetostat shows synthetic lethality in aggressive lymphomas. This approach offers a new therapeutic strategy for H3K27me3-high cancers with specific EZH2 mutations.
Area of Science:
- Epigenetics
- Cancer Biology
- Molecular Oncology
Background:
- Global H3K27me3 reprogramming is a cancer hallmark, but effective therapies for H3K27me3-high malignancies with wild-type EZH2 (EZH2WT/WT) are lacking.
- Aggressive lymphomas exhibit complex epigenome and transcriptome alterations driven by EZH2 mutations (EZH2WT/Mu) and wild-type EZH2 (EZH2WT/WT).
Purpose of the Study:
- To investigate the interplay between EZH1 and EZH2 in aggressive lymphomas.
- To evaluate the efficacy of EZH1/2 dual inhibitors, specifically valemetostat, as a therapeutic strategy.
Main Methods:
- Epigenome and transcriptome analysis in EZH2WT/WT and EZH2WT/Mu lymphoma models.
- Comparative analysis of leading compounds targeting EZH1/2.
- Assessment of synthetic lethality in lymphoma models and primary adult T-cell leukemia-lymphoma (ATL) cells.
Main Results:
- Co-expressed EZH1 and EZH2 exhibit mutual interference and compensatory functions, altering genome-wide distribution and establishing distinct chromatin and gene expression signatures.
- Valemetostat demonstrated potent EZH1/2 dual inhibition with a clear mechanism of action.
- Synthetic lethality was observed across all tested lymphoma models and primary ATL cells.
Conclusions:
- The opposing actions of EZH1/2-polycomb and SWI/SNF complexes are crucial for facultative heterochromatin formation.
- Inactivation of chromatin-associated genes and oncovirus infections can trigger EZH1/2 perturbation and H3K27me3 deposition.
- This study provides a mechanism-based rationale for dual EZH1/2 targeting in cancer epigenome therapy.
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