Related Experiment Video
Updated: Jan 1, 2026

One-step Metabolomics: Carbohydrates, Organic and Amino Acids Quantified in a Single Procedure
Published on: June 25, 2010
Carnitine uptake defect due to a 5'UTR mutation in a pedigree with false positives and false negatives on Newborn
Kate C Verbeeten1, Anne-Marie Lamhonwah2, Dennis Bulman3
1University of Ottawa, Ottawa, ON, Canada.
Insights
Carnitine Uptake Defect (CUD) is a genetic disorder affecting carnitine transport. A novel mutation in the SLC22A5 gene was identified in affected families, impacting carnitine levels and uptake.
Area of Science:
- Genetics
- Biochemistry
- Molecular Biology
Background:
- Carnitine Uptake Defect (CUD) is an autosomal recessive disorder caused by mutations in the SLC22A5 gene, leading to carnitine deficiency.
- Clinical manifestations range from severe infantile symptoms like muscle weakness and cardiomyopathy to later-onset issues such as hypoglycemia and myopathy.
- Newborn screening (NBS) identifies affected infants and can also detect maternal CUD, even in asymptomatic women.
Observation:
- A family was studied after three NBS-positive infants, who were themselves unaffected, revealed affected mothers (sisters).
- Two other affected children, born to an affected father and heterozygous mother, were NBS false negatives but showed increased urinary free carnitine excretion.
- Genetic analysis identified a homozygous mutation (SLC22A5; NM_003060:c.-149G>A) in the 5' UTR in all five probands.
Findings:
- The identified mutation segregates with CUD within the family and has a low frequency (0.001198) in the gnomAD database.
- Affected individuals exhibited decreased plasma carnitine and increased fractional excretion of free carnitine.
- Functional studies in fibroblasts showed significantly reduced carnitine uptake (6% of controls) in a proband, despite increased OCTN2 mRNA expression.
Implications:
- This study identifies a novel 5' UTR mutation in SLC22A5 causing Carnitine Uptake Defect.
- The findings highlight the importance of considering maternal CUD and potential NBS limitations.
- Further research is needed to understand the significance of the observed protein bands and the mechanism of reduced carnitine uptake despite increased mRNA levels.
Abstract:
Carnitine Uptake Defect (CUD) is an autosomal recessive disorder due to mutations in the SLC22A5 gene. Classically patients present in infancy with profound muscle weakness and cardiomyopathy with characteristic EKG findings. Later presentations include recurrent hypoketotic hypoglycemia, proximal limb girdle myopathy,and/or recurrent muscle pain. Newborn screening detects most of these clinical variants but in addition has identified maternal CUD often in asymptomatic women. We describe a family ascertained through 3 newborn screening (NBS) positive infants found to be unaffected themselves but in whom the mothers (sisters) were affected. There were also two affected children born to an affected male and his heterozygous wife who were false negatives on NBS but had increased fractional excretion of free carnitine in the urine. Analysis on a Next Generation Sequencing panel specifically designed to fully cover newborn screening disease targets showed a homozygous change in the five probands (SLC22A5; NM_003060:c.-149G > A; p.?). The mutation segregates with the CUD within the family. It is in the 5' UTR and has a frequency within the gnomAd database of 0.001198. Plasma carnitine was decreased and fractional excretion of free carnitine was increased in all affected individuals. Functional carnitine uptake studies in cultured skin fibroblasts of one proband showed carnitine uptake at the 5 μM concentration to be 6% of controls. Relative expression of OCTN2 mRNA to beta-actin mRNA by qRT-PCR was increased in a proband relative to controls by a factor of 465-fold. Western blotting revealed a 120 kDa protein band, as well as a weaker 240 kDa band in the proband, the significance of which is unknown at this time.
Related Concept Videos
Inborn Errors of Metabolism
Pedigree Analysis
Urea Cycle
Glucose Transporters
Facilitated diffusion-glucose transporters (GLUTs) are encoded by the solute-linked carrier (SLC) family 2, subfamily A gene family, or SLC2A. The 14 GLUT protein members are distributed into three classes:
Animal Mitochondrial Genetics

