Related Experiment Video
Updated: Dec 31, 2025

Investigation of the Transcriptional Role of a RUNX1 Intronic Silencer by CRISPR/Cas9 Ribonucleoprotein in Acute Myeloid Leukemia Cells
Published on: September 1, 2019
Identification of tRNA-derived small RNA (tsRNA) responsive to the tumor suppressor, RUNX1, in breast cancer
Nicholas H Farina1,2,3, Stephanie Scalia3,4, Caroline E Adams3,4
1Department of Biochemistry, Larner College of Medicine, University of Vermont, Burlington, Vermont.
Abstract:
Despite recent advances in targeted therapies, the molecular mechanisms driving breast cancer initiation, progression, and metastasis are minimally understood. Growing evidence indicate that transfer RNA (tRNA)-derived small RNAs (tsRNA) contribute to biological control and aberrations associated with cancer development and progression. The runt-related transcription factor 1 (RUNX1) transcription factor is a tumor suppressor in the mammary epithelium whereas RUNX1 downregulation is functionally associated with breast cancer initiation and progression. We identified four tsRNA (ts-19, ts-29, ts-46, and ts-112) that are selectively responsive to expression of the RUNX1 tumor suppressor. Our finding that ts-112 and RUNX1 anticorrelate in normal-like mammary epithelial and breast cancer lines is consistent with tumor-related activity of ts-112 and tumor suppressor activity of RUNX1. Inhibition of ts-112 in MCF10CA1a aggressive breast cancer cells significantly reduced proliferation. Ectopic expression of a ts-112 mimic in normal-like mammary epithelial MCF10A cells significantly increased proliferation. These findings support an oncogenic potential for ts-112. Moreover, RUNX1 may repress ts-112 to prevent overactive proliferation in breast epithelial cells to augment its established roles in maintaining the mammary epithelium.
Insights
Transfer RNA-derived small RNAs (tsRNAs) influence breast cancer. Researchers found ts-112 promotes proliferation, suggesting it acts as an oncogene, while RUNX1 may suppress it.
Area of Science:
- Molecular biology
- Oncology
- Genetics
Background:
- Breast cancer progression mechanisms remain unclear.
- Transfer RNA-derived small RNAs (tsRNAs) are implicated in cancer.
- RUNX1 is a tumor suppressor in mammary epithelium, with its downregulation linked to breast cancer.
Purpose of the Study:
- To investigate the role of tsRNAs in breast cancer.
- To identify tsRNAs regulated by the RUNX1 tumor suppressor.
- To explore the functional significance of ts-112 in breast cancer.
Main Methods:
- Identification of tsRNAs responsive to RUNX1 expression.
- Analysis of ts-112 and RUNX1 correlation in mammary cell lines.
- Functional assays involving ts-112 inhibition and mimic expression.
Main Results:
- Four tsRNAs (ts-19, ts-29, ts-46, ts-112) were identified as responsive to RUNX1.
- ts-112 expression inversely correlated with RUNX1 in normal and cancerous mammary cells.
- ts-112 inhibition reduced proliferation in aggressive breast cancer cells.
- ts-112 mimic expression increased proliferation in normal mammary epithelial cells.
Conclusions:
- ts-112 exhibits oncogenic potential, promoting breast cancer cell proliferation.
- RUNX1 may exert tumor suppressive functions by repressing ts-112.
- These findings highlight a novel regulatory axis involving RUNX1 and ts-112 in breast cancer.
More Related Videos
06:43A Quantitative Assay to Study Protein:DNA Interactions, Discover Transcriptional Regulators of Gene Expression, and Identify Novel Anti-tumor Agents
Published on: August 31, 2013
11:12Optimization of a Multiplex RNA-based Expression Assay Using Breast Cancer Archival Material
Published on: August 1, 2018
Related Concept Videos
lncRNA - Long Non-coding RNAs
Cancer-Critical Genes II: Tumor Suppressor Genes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...
The Retinoblastoma Gene
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...
The Ras Gene
Ras is a...
Abnormal Proliferation