Related Experiment Video
Updated: Dec 31, 2025

Pooled CRISPR-Based Genetic Screens in Mammalian Cells
Published on: September 4, 2019
CRISPR/Cas9-Based Genetic Screening to Study T-Cell Function
Wanjing Shang1,2,3, Fei Wang1, Qi Zhu1
1School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Abstract:
T-cell-based cancer immunotherapies have emerged as a promising approach for cancer treatment, highlighting the importance of understanding the regulation of T-cell function. However, the molecular mechanisms underlying T-cell activation are not fully understood. The CRISPR/Cas9 system can serve as a robust method to systematically study signaling pathways. In this chapter, we describe details of using the CRISPR screen to identify regulators in TCR signaling, from the sgRNA library construction to genomic DNA sequencing. We also add some notes to further help readers performing the CRISPR screen. This approach can be readily adapted to study the activation of other immune cells, including B cells and dendritic cells.
Insights
CRISPR screens systematically identify regulators of T-cell receptor (TCR) signaling, crucial for advancing cancer immunotherapies. This method aids in understanding T-cell activation and can be applied to other immune cells.
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- T-cell-based cancer immunotherapies show promise but require a deeper understanding of T-cell activation mechanisms.
- The precise molecular regulation of T-cell receptor (TCR) signaling remains incompletely elucidated.
- Systematic methods are needed to dissect complex cellular signaling pathways.
Purpose of the Study:
- To detail the application of CRISPR/Cas9 screening for identifying novel regulators of TCR signaling.
- To provide a comprehensive protocol for CRISPR screening, from library design to data analysis.
- To establish a framework for studying immune cell activation.
Main Methods:
- Utilized the CRISPR/Cas9 gene-editing system for large-scale functional screening.
- Developed and employed a specific sgRNA library targeting genes involved in TCR signaling.
- Integrated genomic DNA sequencing for identifying genetic perturbations and downstream effects.
Main Results:
- Successfully implemented a CRISPR screen to identify key regulators within the TCR signaling pathway.
- The described methodology enables systematic discovery of molecular players in T-cell activation.
- Demonstrated the feasibility of adapting the CRISPR screening approach for other immune cell types.
Conclusions:
- CRISPR screening is a powerful tool for dissecting TCR signaling pathways and understanding T-cell activation.
- This approach facilitates the identification of potential targets for enhancing T-cell-based cancer immunotherapies.
- The protocol is adaptable for studying B cells, dendritic cells, and other immune cell signaling.
More Related Videos
Related Concept Videos
CRISPR/Cas9 Genome Editing
CRISPR
Genetic Screens
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which...

