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Updated: Dec 29, 2025

Defining Gene Functions in Tumorigenesis by Ex vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells
Published on: August 25, 2021
NTRK fusions in osteosarcoma are rare and non-functional events
Baptiste Ameline1, Karim H Saba2, Michal Kovac1
1Bone Tumour Reference Center at the Institute of Pathology, University and University Hospital Basel, Basel, Switzerland.
Abstract:
Neurotrophic tyrosine receptor kinase (NTRK) fusions are promising molecular targets that have been described in a broad range of malignant tumours. Fusions commonly lead to the expression of chimeric proteins with constitutive tyrosine kinase activation that drives tumorigenesis. Despite a low prevalence among most solid tumours (<1%), the first encouraging results with pan-NTRK tyrosine kinase inhibitors (TKIs) such as larotrectinib or entrectinib stimulated the search for eligible patients. Here, we report the first three cases of osteosarcoma harbouring NTRK fusions, among 113 patients sequenced. It is also the first report on NTRK fusions within a tumour type characterised by highly rearranged genomes and abundant passenger mutations. Whereas the presence of NTRK gene fusions in many tumours is considered to be one of the main driver events for tumour progression, the three chimeric transcripts described here appear non-functional and likely represent randomly occurring passenger alterations. Particularly in tumours with complex karyotypes, it may therefore be advisable to specifically investigate the fusion transcripts for functional impact before considering targeted treatment approaches using pan-NTRK TKIs.
Insights
Neurotrophic tyrosine receptor kinase (NTRK) fusions are rare in osteosarcoma. Researchers found three cases, but these NTRK fusions were non-functional, highlighting the need to assess functional impact before targeted therapy.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Neurotrophic tyrosine receptor kinase (NTRK) fusions are oncogenic drivers in various cancers.
- Pan-NTRK tyrosine kinase inhibitors (TKIs) show promise, prompting investigation in diverse tumor types.
Purpose of the Study:
- To report the occurrence and functional significance of NTRK fusions in osteosarcoma.
- To evaluate the role of NTRK fusions in a highly rearranged tumor genome.
Main Methods:
- Next-generation sequencing of 113 osteosarcoma patients.
- Analysis of identified NTRK fusion transcripts for functional impact.
Main Results:
- Three cases of NTRK fusions were identified in 113 osteosarcoma patients (2.6% prevalence).
- The identified NTRK fusion transcripts were determined to be non-functional passengers, not driver mutations.
Conclusions:
- NTRK fusions are rare in osteosarcoma and may not be driver events.
- Functional assessment of NTRK fusions is crucial in complex karyotype tumors before initiating pan-NTRK TKI therapy.
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