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TbCAPs: A toolbox for co-activation pattern analysis.

Thomas A W Bolton1, Constantin Tuleasca2, Diana Wotruba3

  • 1Institute of Bioengineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland; Department of Radiology and Medical Informatics, University of Geneva (UNIGE), Geneva, Switzerland.

Neuroimage
|February 15, 2020
PubMed
Summary
This summary is machine-generated.

This study introduces TbCAPs, a new toolbox for co-activation pattern (CAP) analysis of functional magnetic resonance imaging (fMRI) data. TbCAPs successfully predicts attentional performance from brain activity dynamics.

Keywords:
AttentionCo-activation pattern analysisContinuous performanceDynamic functional connectivityFrame-wise analysisOpen source softwareTask-positive network

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Area of Science:

  • Neuroimaging
  • Computational Neuroscience
  • Cognitive Neuroscience

Background:

  • Functional magnetic resonance imaging (fMRI) offers rich spatio-temporal data on human brain activity.
  • Characterizing brain activity dynamics is crucial for understanding brain function.
  • Co-activation pattern (CAP) analysis is a frame-wise method to identify interacting functional brain networks.

Purpose of the Study:

  • To release TbCAPs, a centralized, publicly accessible toolbox for CAP analysis.
  • To introduce methodological developments enhancing CAP analysis.
  • To demonstrate the utility of CAP analysis in studying human cognition.

Main Methods:

  • Development and release of the TbCAPs toolbox for comprehensive CAP analysis.
  • Application of CAP analysis to resting-state fMRI data using the right dorsolateral prefrontal cortex as a seed region.
  • Prediction of behavioral measures using dynamic CAP metrics.

Main Results:

  • The TbCAPs toolbox provides a complete pipeline for CAP analysis, including new methodological advancements.
  • CAPs were successfully constructed from resting-state fMRI data.
  • A significant prediction (R=0.59) of continuous attentional performance was achieved using CAP dynamics metrics.

Conclusions:

  • The TbCAPs toolbox facilitates the deployment and inspection of CAP analysis.
  • CAP analysis, powered by TbCAPs, is a feasible and useful method for investigating brain dynamics and cognitive functions.
  • This approach holds potential for clinical applications by linking brain activity patterns to behavioral outcomes.