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Free log-likelihood as an unbiased metric for coherent diffraction imaging
Vincent Favre-Nicolin1,2, Steven Leake3, Yuriy Chushkin3
1ESRF, The European Synchrotron, 71 Avenue des Martyrs, 38000, Grenoble, France. favre@esrf.fr.
Scientific Reports
|February 16, 2020
Summary
A new free log-likelihood indicator validates Coherent Diffraction Imaging (CDI) reconstructions without prior object knowledge. This method uses masked data points for unbiased evaluation, improving accuracy for diverse materials and advanced X-ray sources.
Area of Science:
- X-ray science
- Diffraction imaging
- Computational imaging
Background:
- Coherent Diffraction Imaging (CDI) reconstructs objects from diffraction patterns, but phase recovery is challenged by unknown object support.
- Uncertainty in object support leads to over-fitting and hinders objective evaluation of CDI solutions.
- Existing methods lack an unbiased metric for validating reconstructions across different sample types.
Purpose of the Study:
- To introduce a novel, unbiased metric for evaluating the validity of Coherent Diffraction Imaging solutions.
- To develop a method for improving object support estimation using eigen-decomposition of solution sets.
- To demonstrate the applicability of the proposed method for diverse materials and advanced X-ray sources.
Main Methods:
- A 'free' log-likelihood indicator is proposed, utilizing a small percentage of masked data points during reconstruction.
- This indicator provides an unbiased evaluation metric, independent of the specific sample characteristics.
- Eigen-decomposition of multiple solutions is employed to refine the estimate of the true object.
Main Results:
- The free log-likelihood indicator effectively validates CDI reconstructions without prior knowledge of object support.
- Eigen-decomposition analysis yields improved estimates of the object's true form from a set of solutions.
- Successful analysis was demonstrated on both test pattern datasets and experimental diffraction data from cyanobacteria.
Conclusions:
- The proposed method offers an unbiased approach for validating CDI reconstructions across hard condensed and biological materials.
- This technique is particularly valuable for unsupervised data evaluation in high-throughput experiments at 4th generation synchrotrons and X-ray free-electron lasers.
- The free log-likelihood indicator and eigen-decomposition analysis enhance the reliability and accuracy of CDI.
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