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Published on: October 21, 2014
Model Averaging in Viral Dynamic Models
Antonio Gonçalves1, France Mentré2, Annabelle Lemenuel-Diot3
1Université de Paris, IAME, INSERM, Henri Huchard, F-75018, Paris, France. antonio.goncalves@inserm.fr.
Model averaging (MA) better estimates parameter uncertainty in viral dynamics models than model selection (MS). MA provides reliable coverage rates, unlike MS, which can lead to inaccurate predictions due to ignoring model uncertainty.
Area of Science:
- Mathematical modeling
- Virology
- Statistical inference
Background:
- Paucity of experimental data complicates viral dynamic model inference and prediction.
- Model selection (MS) presents results from the 'best' model, ignoring uncertainty.
- Model averaging (MA) weights predictions from multiple models based on data consistency.
Purpose of the Study:
- Evaluate the performance of MS versus MA in viral dynamic models.
- Assess methods under conditions of poorly identifiable parameters and immune response uncertainty.
- Compare parameter uncertainty estimation and prediction accuracy between MS and MA.
Main Methods:
- Simulations using a nonlinear mixed-effect model framework.
- Two realistic acute viral infection scenarios were simulated.
- Performance metrics included false selection rates and coverage rates for parameter uncertainty.
Main Results:
- MS exhibited a high rate of false selection in some scenarios.
- MS resulted in coverage rates below the nominal 0.95, sometimes below 0.50.
- MA demonstrated improved parameter uncertainty estimation with coverage rates mostly within the nominal range (0.72-0.98).
- MA yielded predictions comparable to those from MS.
Conclusions:
- Parameter estimates from MS should be used cautiously, especially when multiple models fit the data well.
- MA offers superior performance in accounting for model uncertainty.
- MA is recommended for more reliable inference and prediction in viral dynamics modeling.
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